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Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)

Very little is known about the genes responsible for Au uptake, reduction and detoxification in plants, which indeed essential to understand the complex trait of AuNP biosynthesis. We designed a targeted experiment to elucidate the response of plant at transcriptional level under Au exposure, and a...

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Detalles Bibliográficos
Autores principales: Shukla, Devesh, Krishnamurthy, Sneha, Sahi, Shivendra V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536028/
https://www.ncbi.nlm.nih.gov/pubmed/26484157
http://dx.doi.org/10.1016/j.gdata.2014.12.001
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author Shukla, Devesh
Krishnamurthy, Sneha
Sahi, Shivendra V.
author_facet Shukla, Devesh
Krishnamurthy, Sneha
Sahi, Shivendra V.
author_sort Shukla, Devesh
collection PubMed
description Very little is known about the genes responsible for Au uptake, reduction and detoxification in plants, which indeed essential to understand the complex trait of AuNP biosynthesis. We designed a targeted experiment to elucidate the response of plant at transcriptional level under Au exposure, and a microarray was performed on root tissue treated with AuCl(4)(−) in the absence of nutrient media to record specific gene expression signature. Here, we describe the experimental procedures and data analysis in detail to reproduce the results (available at GEO database under GSE55436) published by Shukla et al. (2014) [1] in the Frontiers in Plant Sciences. The data produced from this study provide significant information of genes which may be used to enhance the AuNP biosynthesis.
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spelling pubmed-45360282015-10-19 Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs) Shukla, Devesh Krishnamurthy, Sneha Sahi, Shivendra V. Genom Data Data in Brief Very little is known about the genes responsible for Au uptake, reduction and detoxification in plants, which indeed essential to understand the complex trait of AuNP biosynthesis. We designed a targeted experiment to elucidate the response of plant at transcriptional level under Au exposure, and a microarray was performed on root tissue treated with AuCl(4)(−) in the absence of nutrient media to record specific gene expression signature. Here, we describe the experimental procedures and data analysis in detail to reproduce the results (available at GEO database under GSE55436) published by Shukla et al. (2014) [1] in the Frontiers in Plant Sciences. The data produced from this study provide significant information of genes which may be used to enhance the AuNP biosynthesis. Elsevier 2014-12-23 /pmc/articles/PMC4536028/ /pubmed/26484157 http://dx.doi.org/10.1016/j.gdata.2014.12.001 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Shukla, Devesh
Krishnamurthy, Sneha
Sahi, Shivendra V.
Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title_full Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title_fullStr Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title_full_unstemmed Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title_short Microarray analysis of Arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (AuNPs)
title_sort microarray analysis of arabidopsis under gold exposure to identify putative genes involved in the synthesis of gold nanoparticles (aunps)
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536028/
https://www.ncbi.nlm.nih.gov/pubmed/26484157
http://dx.doi.org/10.1016/j.gdata.2014.12.001
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