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Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis

The ITAM-bearing transmembrane signaling subunits (TSS) are indispensable components of activating leukocyte receptor complexes. The TSS-encoding genes map to paralogous chromosomal regions, which are thought to arise from ancient genome tetraploidization(s). To assess a possible role of tetraploidi...

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Autores principales: Guselnikov, S.V., Grayfer, L., De Jesús Andino, F., Rogozin, I.B., Robert, J., Taranin, A.V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536121/
https://www.ncbi.nlm.nih.gov/pubmed/26170006
http://dx.doi.org/10.1016/j.dci.2015.07.002
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author Guselnikov, S.V.
Grayfer, L.
De Jesús Andino, F.
Rogozin, I.B.
Robert, J.
Taranin, A.V.
author_facet Guselnikov, S.V.
Grayfer, L.
De Jesús Andino, F.
Rogozin, I.B.
Robert, J.
Taranin, A.V.
author_sort Guselnikov, S.V.
collection PubMed
description The ITAM-bearing transmembrane signaling subunits (TSS) are indispensable components of activating leukocyte receptor complexes. The TSS-encoding genes map to paralogous chromosomal regions, which are thought to arise from ancient genome tetraploidization(s). To assess a possible role of tetraploidization in the TSS evolution, we studied TSS and other functionally linked genes in the amphibian species Xenopus laevis whose genome was duplicated about 40 MYR ago. We found that X. laevis has retained a duplicated set of sixteen TSS genes, all except one being transcribed. Furthermore, duplicated TCRα loci and genes encoding TSS-coupling protein kinases have also been retained. No clear evidence for functional divergence of the TSS paralogs was obtained from gene expression and sequence analyses. We suggest that the main factor of maintenance of duplicated TSS genes in X. laevis was a protein dosage effect and that this effect might have facilitated the TSS set expansion in early vertebrates.
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spelling pubmed-45361212016-11-01 Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis Guselnikov, S.V. Grayfer, L. De Jesús Andino, F. Rogozin, I.B. Robert, J. Taranin, A.V. Dev Comp Immunol Article The ITAM-bearing transmembrane signaling subunits (TSS) are indispensable components of activating leukocyte receptor complexes. The TSS-encoding genes map to paralogous chromosomal regions, which are thought to arise from ancient genome tetraploidization(s). To assess a possible role of tetraploidization in the TSS evolution, we studied TSS and other functionally linked genes in the amphibian species Xenopus laevis whose genome was duplicated about 40 MYR ago. We found that X. laevis has retained a duplicated set of sixteen TSS genes, all except one being transcribed. Furthermore, duplicated TCRα loci and genes encoding TSS-coupling protein kinases have also been retained. No clear evidence for functional divergence of the TSS paralogs was obtained from gene expression and sequence analyses. We suggest that the main factor of maintenance of duplicated TSS genes in X. laevis was a protein dosage effect and that this effect might have facilitated the TSS set expansion in early vertebrates. 2015-07-11 2015-11 /pmc/articles/PMC4536121/ /pubmed/26170006 http://dx.doi.org/10.1016/j.dci.2015.07.002 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Guselnikov, S.V.
Grayfer, L.
De Jesús Andino, F.
Rogozin, I.B.
Robert, J.
Taranin, A.V.
Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title_full Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title_fullStr Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title_full_unstemmed Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title_short Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis
title_sort retention of duplicated itam-containing transmembrane signaling subunits in the tetraploid amphibian species xenopus laevis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536121/
https://www.ncbi.nlm.nih.gov/pubmed/26170006
http://dx.doi.org/10.1016/j.dci.2015.07.002
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