Cargando…
Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation
In a preceding study we have recently established an in vivo visualization system for the geranylgeranylation of proteins in a stably transformed tobacco BY-2 cell line, which involves expressing a dexamethasone-inducible GFP fused to the prenylable, carboxy-terminal basic domain of the rice calmodu...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536634/ https://www.ncbi.nlm.nih.gov/pubmed/26309725 http://dx.doi.org/10.12688/f1000research.5923.2 |
_version_ | 1782385767818985472 |
---|---|
author | Hartmann, Michael Gas-Pascual, Elisabet Hemmerlin, Andrea Rohmer, Michel Bach, Thomas J. |
author_facet | Hartmann, Michael Gas-Pascual, Elisabet Hemmerlin, Andrea Rohmer, Michel Bach, Thomas J. |
author_sort | Hartmann, Michael |
collection | PubMed |
description | In a preceding study we have recently established an in vivo visualization system for the geranylgeranylation of proteins in a stably transformed tobacco BY-2 cell line, which involves expressing a dexamethasone-inducible GFP fused to the prenylable, carboxy-terminal basic domain of the rice calmodulin CaM61, which naturally bears a CaaL geranylgeranylation motif (GFP-BD-CVIL). By using pathway-specific inhibitors it was there demonstrated that inhibition of the methylerythritol phosphate (MEP) pathway with oxoclomazone and fosmidomycin, as well as inhibition of protein geranylgeranyl transferase type 1 (PGGT-1), shifted the localization of the GFP-BD-CVIL protein from the membrane to the nucleus. In contrast, the inhibition of the mevalonate (MVA) pathway with mevinolin did not affect this localization. Furthermore, in this initial study complementation assays with pathway-specific intermediates confirmed that the precursors for the cytosolic isoprenylation of this fusion protein are predominantly provided by the MEP pathway. In order to optimize this visualization system from a more qualitative assay to a statistically trustable medium or a high-throughput screening system, we established now new conditions that permit culture and analysis in 96-well microtiter plates, followed by fluorescence microscopy. For further refinement, the existing GFP-BD-CVIL cell line was transformed with an estradiol-inducible vector driving the expression of a RFP protein, C-terminally fused to a nuclear localization signal (NLS-RFP). We are thus able to quantify the total number of viable cells versus the number of inhibited cells after various treatments. This approach also includes a semi-automatic counting system, based on the freely available image processing software. As a result, the time of image analysis as well as the risk of user-generated bias is reduced to a minimum. Moreover, there is no cross-induction of gene expression by dexamethasone and estradiol, which is an important prerequisite for this test system. |
format | Online Article Text |
id | pubmed-4536634 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-45366342015-08-24 Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation Hartmann, Michael Gas-Pascual, Elisabet Hemmerlin, Andrea Rohmer, Michel Bach, Thomas J. F1000Res Method Article In a preceding study we have recently established an in vivo visualization system for the geranylgeranylation of proteins in a stably transformed tobacco BY-2 cell line, which involves expressing a dexamethasone-inducible GFP fused to the prenylable, carboxy-terminal basic domain of the rice calmodulin CaM61, which naturally bears a CaaL geranylgeranylation motif (GFP-BD-CVIL). By using pathway-specific inhibitors it was there demonstrated that inhibition of the methylerythritol phosphate (MEP) pathway with oxoclomazone and fosmidomycin, as well as inhibition of protein geranylgeranyl transferase type 1 (PGGT-1), shifted the localization of the GFP-BD-CVIL protein from the membrane to the nucleus. In contrast, the inhibition of the mevalonate (MVA) pathway with mevinolin did not affect this localization. Furthermore, in this initial study complementation assays with pathway-specific intermediates confirmed that the precursors for the cytosolic isoprenylation of this fusion protein are predominantly provided by the MEP pathway. In order to optimize this visualization system from a more qualitative assay to a statistically trustable medium or a high-throughput screening system, we established now new conditions that permit culture and analysis in 96-well microtiter plates, followed by fluorescence microscopy. For further refinement, the existing GFP-BD-CVIL cell line was transformed with an estradiol-inducible vector driving the expression of a RFP protein, C-terminally fused to a nuclear localization signal (NLS-RFP). We are thus able to quantify the total number of viable cells versus the number of inhibited cells after various treatments. This approach also includes a semi-automatic counting system, based on the freely available image processing software. As a result, the time of image analysis as well as the risk of user-generated bias is reduced to a minimum. Moreover, there is no cross-induction of gene expression by dexamethasone and estradiol, which is an important prerequisite for this test system. F1000Research 2015-08-12 /pmc/articles/PMC4536634/ /pubmed/26309725 http://dx.doi.org/10.12688/f1000research.5923.2 Text en Copyright: © 2015 Hartmann M et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Hartmann, Michael Gas-Pascual, Elisabet Hemmerlin, Andrea Rohmer, Michel Bach, Thomas J. Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title | Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title_full | Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title_fullStr | Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title_full_unstemmed | Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title_short | Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation |
title_sort | development of an image-based screening system for inhibitors of the plastidial mep pathway and of protein geranylgeranylation |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536634/ https://www.ncbi.nlm.nih.gov/pubmed/26309725 http://dx.doi.org/10.12688/f1000research.5923.2 |
work_keys_str_mv | AT hartmannmichael developmentofanimagebasedscreeningsystemforinhibitorsoftheplastidialmeppathwayandofproteingeranylgeranylation AT gaspascualelisabet developmentofanimagebasedscreeningsystemforinhibitorsoftheplastidialmeppathwayandofproteingeranylgeranylation AT hemmerlinandrea developmentofanimagebasedscreeningsystemforinhibitorsoftheplastidialmeppathwayandofproteingeranylgeranylation AT rohmermichel developmentofanimagebasedscreeningsystemforinhibitorsoftheplastidialmeppathwayandofproteingeranylgeranylation AT bachthomasj developmentofanimagebasedscreeningsystemforinhibitorsoftheplastidialmeppathwayandofproteingeranylgeranylation |