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Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia

Soil contamination with petroleum hydrocarbon products such as diesel and engine oil is becoming one of the major environmental problems. This study describes hydrocarbons degrading bacteria (PHAD) isolated from long-standing petrol polluted soil from the eastern region, Dammam, Saudi Arabia. The is...

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Autores principales: Ibrahim, Mohamed M., Al-Turki, Ameena, Al-Sewedi, Dona, Arif, Ibrahim A., El-Gaaly, Gehan A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4537879/
https://www.ncbi.nlm.nih.gov/pubmed/26288572
http://dx.doi.org/10.1016/j.sjbs.2015.04.018
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author Ibrahim, Mohamed M.
Al-Turki, Ameena
Al-Sewedi, Dona
Arif, Ibrahim A.
El-Gaaly, Gehan A.
author_facet Ibrahim, Mohamed M.
Al-Turki, Ameena
Al-Sewedi, Dona
Arif, Ibrahim A.
El-Gaaly, Gehan A.
author_sort Ibrahim, Mohamed M.
collection PubMed
description Soil contamination with petroleum hydrocarbon products such as diesel and engine oil is becoming one of the major environmental problems. This study describes hydrocarbons degrading bacteria (PHAD) isolated from long-standing petrol polluted soil from the eastern region, Dammam, Saudi Arabia. The isolated strains were firstly categorized by accessible shape detection, physiological and biochemistry tests. Thereafter, a technique established on the sequence analysis of a 16S rDNA gene was used. Isolation of DNA from the bacterial strains was performed, on which the PCR reaction was carried out. Strains were identified based on 16S rDNA sequence analysis, As follows amplified samples were spontaneously sequenced automatically and the attained results were matched to open databases. Among the isolated bacterial strains, S1 was identified as Staphylococcus aureus and strain S1 as Corynebacterium amycolatum.
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spelling pubmed-45378792015-08-18 Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia Ibrahim, Mohamed M. Al-Turki, Ameena Al-Sewedi, Dona Arif, Ibrahim A. El-Gaaly, Gehan A. Saudi J Biol Sci Original Article Soil contamination with petroleum hydrocarbon products such as diesel and engine oil is becoming one of the major environmental problems. This study describes hydrocarbons degrading bacteria (PHAD) isolated from long-standing petrol polluted soil from the eastern region, Dammam, Saudi Arabia. The isolated strains were firstly categorized by accessible shape detection, physiological and biochemistry tests. Thereafter, a technique established on the sequence analysis of a 16S rDNA gene was used. Isolation of DNA from the bacterial strains was performed, on which the PCR reaction was carried out. Strains were identified based on 16S rDNA sequence analysis, As follows amplified samples were spontaneously sequenced automatically and the attained results were matched to open databases. Among the isolated bacterial strains, S1 was identified as Staphylococcus aureus and strain S1 as Corynebacterium amycolatum. Elsevier 2015-09 2015-05-05 /pmc/articles/PMC4537879/ /pubmed/26288572 http://dx.doi.org/10.1016/j.sjbs.2015.04.018 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Ibrahim, Mohamed M.
Al-Turki, Ameena
Al-Sewedi, Dona
Arif, Ibrahim A.
El-Gaaly, Gehan A.
Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title_full Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title_fullStr Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title_full_unstemmed Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title_short Molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (PAHD) species isolated from oil polluted soil in Dammam, Saud Arabia
title_sort molecular application for identification of polycyclic aromatic hydrocarbons degrading bacteria (pahd) species isolated from oil polluted soil in dammam, saud arabia
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4537879/
https://www.ncbi.nlm.nih.gov/pubmed/26288572
http://dx.doi.org/10.1016/j.sjbs.2015.04.018
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