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Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis

Hexachlorocyclohexane (HCH) was among the most commonly used pesticides after the Second World War. The extensive use of this hydrocarbon for almost six decades has created a contamination problem on a global scale, and bioremediation methods are being extensively explored. The reported ability of s...

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Detalles Bibliográficos
Autores principales: Hassan, Yousef I., Lepp, Dion, Li, Xiu-Zhen, Zhou, Ting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4541263/
https://www.ncbi.nlm.nih.gov/pubmed/26251505
http://dx.doi.org/10.1128/genomeA.00890-15
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author Hassan, Yousef I.
Lepp, Dion
Li, Xiu-Zhen
Zhou, Ting
author_facet Hassan, Yousef I.
Lepp, Dion
Li, Xiu-Zhen
Zhou, Ting
author_sort Hassan, Yousef I.
collection PubMed
description Hexachlorocyclohexane (HCH) was among the most commonly used pesticides after the Second World War. The extensive use of this hydrocarbon for almost six decades has created a contamination problem on a global scale, and bioremediation methods are being extensively explored. The reported ability of some Devosia species to grow in the presence of appreciable amounts of hydrocarbons (2,000 mg/kg of contaminated soil) is attracting closer attention. Here, we report the de novo genome assembly of two hydrocarbon-tolerating Devosia isolates, D. chinhatensis strain IPL18(T) and D. geojensis strain BD-c194(T), as a first step toward understanding the metabolic pathways involved in their environmental adaptation and tolerance toward hydrocarbons.
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spelling pubmed-45412632015-08-19 Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis Hassan, Yousef I. Lepp, Dion Li, Xiu-Zhen Zhou, Ting Genome Announc Prokaryotes Hexachlorocyclohexane (HCH) was among the most commonly used pesticides after the Second World War. The extensive use of this hydrocarbon for almost six decades has created a contamination problem on a global scale, and bioremediation methods are being extensively explored. The reported ability of some Devosia species to grow in the presence of appreciable amounts of hydrocarbons (2,000 mg/kg of contaminated soil) is attracting closer attention. Here, we report the de novo genome assembly of two hydrocarbon-tolerating Devosia isolates, D. chinhatensis strain IPL18(T) and D. geojensis strain BD-c194(T), as a first step toward understanding the metabolic pathways involved in their environmental adaptation and tolerance toward hydrocarbons. American Society for Microbiology 2015-08-06 /pmc/articles/PMC4541263/ /pubmed/26251505 http://dx.doi.org/10.1128/genomeA.00890-15 Text en Copyright © 2015 Hassan et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Hassan, Yousef I.
Lepp, Dion
Li, Xiu-Zhen
Zhou, Ting
Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title_full Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title_fullStr Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title_full_unstemmed Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title_short Insights into the Hydrocarbon Tolerance of Two Devosia Isolates, D. chinhatensis Strain IPL18(T) and D. geojensis Strain BD-c194(T), via Whole-Genome Sequence Analysis
title_sort insights into the hydrocarbon tolerance of two devosia isolates, d. chinhatensis strain ipl18(t) and d. geojensis strain bd-c194(t), via whole-genome sequence analysis
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4541263/
https://www.ncbi.nlm.nih.gov/pubmed/26251505
http://dx.doi.org/10.1128/genomeA.00890-15
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