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High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States

Lance nematodes (Hoplolaimus spp.) feed on the roots of a wide range of plants, some of which are agronomic crops. Morphometric values of amphimictic lance nematode species overlap considerably, and useful morphological characters for their discrimination require high magnification and significant d...

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Autores principales: Holguin, Claudia M, Baeza, Juan A, Mueller, John D, Agudelo, Paula
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4541996/
https://www.ncbi.nlm.nih.gov/pubmed/26306177
http://dx.doi.org/10.1002/ece3.1568
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author Holguin, Claudia M
Baeza, Juan A
Mueller, John D
Agudelo, Paula
author_facet Holguin, Claudia M
Baeza, Juan A
Mueller, John D
Agudelo, Paula
author_sort Holguin, Claudia M
collection PubMed
description Lance nematodes (Hoplolaimus spp.) feed on the roots of a wide range of plants, some of which are agronomic crops. Morphometric values of amphimictic lance nematode species overlap considerably, and useful morphological characters for their discrimination require high magnification and significant diagnostic time. Given their morphological similarity, these Hoplolaimus species provide an interesting model to investigate hidden diversity in crop agroecosystems. In this scenario, H. galeatus may have been over-reported and the related species that are morphologically similar could be more widespread in the United States that has been recognized thus far. The main objectives of this study were to delimit Hoplolaimus galeatus and morphologically similar species using morphology, phylogeny, and a barcoding approach, and to estimate the genetic diversity and population structure of the species found. Molecular analyses were performed using sequences of the cytochrome c oxidase subunit 1 (Cox1) and the internal transcribed spacer (ITS1) on 23 populations. Four morphospecies were identified: H. galeatus, H. magnistylus, H. concaudajuvencus, and H. stephanus, along with a currently undescribed species. Pronounced genetic structure correlated with geographic origin was found for all species, except for H. galeatus. Hoplolaimus galeatus also exhibited low genetic diversity and the shortest genetic distances among populations. In contrast, H. stephanus, the species with the fewest reports from agricultural soils, was the most common and diverse species found. Results of this project may lead to better delimitation of lance nematode species in the United States by contributing to the understanding the diversity within this group.
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spelling pubmed-45419962015-08-24 High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States Holguin, Claudia M Baeza, Juan A Mueller, John D Agudelo, Paula Ecol Evol Original Research Lance nematodes (Hoplolaimus spp.) feed on the roots of a wide range of plants, some of which are agronomic crops. Morphometric values of amphimictic lance nematode species overlap considerably, and useful morphological characters for their discrimination require high magnification and significant diagnostic time. Given their morphological similarity, these Hoplolaimus species provide an interesting model to investigate hidden diversity in crop agroecosystems. In this scenario, H. galeatus may have been over-reported and the related species that are morphologically similar could be more widespread in the United States that has been recognized thus far. The main objectives of this study were to delimit Hoplolaimus galeatus and morphologically similar species using morphology, phylogeny, and a barcoding approach, and to estimate the genetic diversity and population structure of the species found. Molecular analyses were performed using sequences of the cytochrome c oxidase subunit 1 (Cox1) and the internal transcribed spacer (ITS1) on 23 populations. Four morphospecies were identified: H. galeatus, H. magnistylus, H. concaudajuvencus, and H. stephanus, along with a currently undescribed species. Pronounced genetic structure correlated with geographic origin was found for all species, except for H. galeatus. Hoplolaimus galeatus also exhibited low genetic diversity and the shortest genetic distances among populations. In contrast, H. stephanus, the species with the fewest reports from agricultural soils, was the most common and diverse species found. Results of this project may lead to better delimitation of lance nematode species in the United States by contributing to the understanding the diversity within this group. John Wiley & Sons, Ltd 2015-07 2015-07-03 /pmc/articles/PMC4541996/ /pubmed/26306177 http://dx.doi.org/10.1002/ece3.1568 Text en © 2015 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Holguin, Claudia M
Baeza, Juan A
Mueller, John D
Agudelo, Paula
High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title_full High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title_fullStr High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title_full_unstemmed High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title_short High genetic diversity and geographic subdivision of three lance nematode species (Hoplolaimus spp.) in the United States
title_sort high genetic diversity and geographic subdivision of three lance nematode species (hoplolaimus spp.) in the united states
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4541996/
https://www.ncbi.nlm.nih.gov/pubmed/26306177
http://dx.doi.org/10.1002/ece3.1568
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