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Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China

The genus Nocardiopsis is a widespread group within the phylum Actinobacteria and has been isolated from various salty environments worldwide. However, little is known about whether biogeography affects Nocardiopsis distribution in various hypersaline environments. Such information is essential for...

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Autores principales: He, Song-Tao, Zhi, Xiao-Yang, Jiang, Hongchen, Yang, Ling-Ling, Wu, Jin-Yuan, Zhang, Yong-Guang, Hozzein, Wael N., Li, Wen-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4542603/
https://www.ncbi.nlm.nih.gov/pubmed/26289784
http://dx.doi.org/10.1038/srep13323
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author He, Song-Tao
Zhi, Xiao-Yang
Jiang, Hongchen
Yang, Ling-Ling
Wu, Jin-Yuan
Zhang, Yong-Guang
Hozzein, Wael N.
Li, Wen-Jun
author_facet He, Song-Tao
Zhi, Xiao-Yang
Jiang, Hongchen
Yang, Ling-Ling
Wu, Jin-Yuan
Zhang, Yong-Guang
Hozzein, Wael N.
Li, Wen-Jun
author_sort He, Song-Tao
collection PubMed
description The genus Nocardiopsis is a widespread group within the phylum Actinobacteria and has been isolated from various salty environments worldwide. However, little is known about whether biogeography affects Nocardiopsis distribution in various hypersaline environments. Such information is essential for understanding the ecology of Nocardiopsis. Here we analyzed 16S rRNA, gyrB, rpoB and sodA genes of 78 Nocardiopsis strains isolated from hypersaline environments in Yunnan and Xinjiang Provinces of western China. The obtained Nocardiopsis strains were classified into five operational taxonomic units, each comprising location-specific phylo- and genotypes. Statistical analyses showed that spatial distance and environmental factors substantially influenced Nocardiopsis distribution in hypersaline environments: the former had stronger influence at large spatial scales, whereas the latter was more influential at small spatial scales.
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spelling pubmed-45426032015-09-01 Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China He, Song-Tao Zhi, Xiao-Yang Jiang, Hongchen Yang, Ling-Ling Wu, Jin-Yuan Zhang, Yong-Guang Hozzein, Wael N. Li, Wen-Jun Sci Rep Article The genus Nocardiopsis is a widespread group within the phylum Actinobacteria and has been isolated from various salty environments worldwide. However, little is known about whether biogeography affects Nocardiopsis distribution in various hypersaline environments. Such information is essential for understanding the ecology of Nocardiopsis. Here we analyzed 16S rRNA, gyrB, rpoB and sodA genes of 78 Nocardiopsis strains isolated from hypersaline environments in Yunnan and Xinjiang Provinces of western China. The obtained Nocardiopsis strains were classified into five operational taxonomic units, each comprising location-specific phylo- and genotypes. Statistical analyses showed that spatial distance and environmental factors substantially influenced Nocardiopsis distribution in hypersaline environments: the former had stronger influence at large spatial scales, whereas the latter was more influential at small spatial scales. Nature Publishing Group 2015-08-20 /pmc/articles/PMC4542603/ /pubmed/26289784 http://dx.doi.org/10.1038/srep13323 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
He, Song-Tao
Zhi, Xiao-Yang
Jiang, Hongchen
Yang, Ling-Ling
Wu, Jin-Yuan
Zhang, Yong-Guang
Hozzein, Wael N.
Li, Wen-Jun
Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title_full Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title_fullStr Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title_full_unstemmed Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title_short Biogeography of Nocardiopsis strains from hypersaline environments of Yunnan and Xinjiang Provinces, western China
title_sort biogeography of nocardiopsis strains from hypersaline environments of yunnan and xinjiang provinces, western china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4542603/
https://www.ncbi.nlm.nih.gov/pubmed/26289784
http://dx.doi.org/10.1038/srep13323
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