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Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)

PREMISE OF THE STUDY: Microsatellite markers were developed for the critically endangered carnivorous species Philcoxia minensis (Plantaginaceae) for further population genetic studies aiming at its conservation. METHODS AND RESULTS: We identified 29 clones containing 40 microsatellites from a genom...

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Autores principales: Scatigna, André V., Oliveira, Fernanda A., Mantello, Camila C., Francisco, Patrícia M., Souza, Anete P., Simões, André O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4542941/
https://www.ncbi.nlm.nih.gov/pubmed/26312194
http://dx.doi.org/10.3732/apps.1500035
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author Scatigna, André V.
Oliveira, Fernanda A.
Mantello, Camila C.
Francisco, Patrícia M.
Souza, Anete P.
Simões, André O.
author_facet Scatigna, André V.
Oliveira, Fernanda A.
Mantello, Camila C.
Francisco, Patrícia M.
Souza, Anete P.
Simões, André O.
author_sort Scatigna, André V.
collection PubMed
description PREMISE OF THE STUDY: Microsatellite markers were developed for the critically endangered carnivorous species Philcoxia minensis (Plantaginaceae) for further population genetic studies aiming at its conservation. METHODS AND RESULTS: We identified 29 clones containing 40 microsatellites from a genomic enriched library. A total of 27 primer pairs were developed and evaluated in 30 individuals of a natural P. minensis population. Seventeen markers successfully presented amplification products within the expected size range, of which 12 were polymorphic. The expected and observed heterozygosities ranged from 0.03 to 0.65 and from 0.00 to 0.77, respectively. Positive transferability with the related species P. bahiensis was observed for the same 17 markers. CONCLUSIONS: The 12 polymorphic microsatellite markers are suitable for studies in genetic diversity and structure, mating system, and gene flow in P. minensis and also may be useful for similar issues regarding the related species P. bahiensis.
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spelling pubmed-45429412015-08-26 Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1) Scatigna, André V. Oliveira, Fernanda A. Mantello, Camila C. Francisco, Patrícia M. Souza, Anete P. Simões, André O. Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for the critically endangered carnivorous species Philcoxia minensis (Plantaginaceae) for further population genetic studies aiming at its conservation. METHODS AND RESULTS: We identified 29 clones containing 40 microsatellites from a genomic enriched library. A total of 27 primer pairs were developed and evaluated in 30 individuals of a natural P. minensis population. Seventeen markers successfully presented amplification products within the expected size range, of which 12 were polymorphic. The expected and observed heterozygosities ranged from 0.03 to 0.65 and from 0.00 to 0.77, respectively. Positive transferability with the related species P. bahiensis was observed for the same 17 markers. CONCLUSIONS: The 12 polymorphic microsatellite markers are suitable for studies in genetic diversity and structure, mating system, and gene flow in P. minensis and also may be useful for similar issues regarding the related species P. bahiensis. Botanical Society of America 2015-08-17 /pmc/articles/PMC4542941/ /pubmed/26312194 http://dx.doi.org/10.3732/apps.1500035 Text en © 2015 Scatigna et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Scatigna, André V.
Oliveira, Fernanda A.
Mantello, Camila C.
Francisco, Patrícia M.
Souza, Anete P.
Simões, André O.
Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title_full Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title_fullStr Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title_full_unstemmed Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title_short Microsatellite markers for studies with the carnivorous plant Philcoxia minensis (Plantaginaceae)(1)
title_sort microsatellite markers for studies with the carnivorous plant philcoxia minensis (plantaginaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4542941/
https://www.ncbi.nlm.nih.gov/pubmed/26312194
http://dx.doi.org/10.3732/apps.1500035
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