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Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification

The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS wa...

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Autores principales: Pérez-Sancho, Marta, Vela, Ana Isabel, García-Seco, Teresa, Gottschalk, Marcelo, Domínguez, Lucas, Fernández-Garayzábal, José Francisco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4543777/
https://www.ncbi.nlm.nih.gov/pubmed/26347858
http://dx.doi.org/10.3389/fpubh.2015.00202
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author Pérez-Sancho, Marta
Vela, Ana Isabel
García-Seco, Teresa
Gottschalk, Marcelo
Domínguez, Lucas
Fernández-Garayzábal, José Francisco
author_facet Pérez-Sancho, Marta
Vela, Ana Isabel
García-Seco, Teresa
Gottschalk, Marcelo
Domínguez, Lucas
Fernández-Garayzábal, José Francisco
author_sort Pérez-Sancho, Marta
collection PubMed
description The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values ≥2.300 and 79 isolates (61.24%) gave score values between 2.299 and 2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7, and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of ≥2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis.
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spelling pubmed-45437772015-09-07 Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification Pérez-Sancho, Marta Vela, Ana Isabel García-Seco, Teresa Gottschalk, Marcelo Domínguez, Lucas Fernández-Garayzábal, José Francisco Front Public Health Public Health The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values ≥2.300 and 79 isolates (61.24%) gave score values between 2.299 and 2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7, and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of ≥2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis. Frontiers Media S.A. 2015-08-21 /pmc/articles/PMC4543777/ /pubmed/26347858 http://dx.doi.org/10.3389/fpubh.2015.00202 Text en Copyright © 2015 Pérez-Sancho, Vela, García-Seco, Gottschalk, Domínguez and Fernández-Garayzábal. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Pérez-Sancho, Marta
Vela, Ana Isabel
García-Seco, Teresa
Gottschalk, Marcelo
Domínguez, Lucas
Fernández-Garayzábal, José Francisco
Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title_full Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title_fullStr Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title_full_unstemmed Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title_short Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification
title_sort assessment of maldi-tof ms as alternative tool for streptococcus suis identification
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4543777/
https://www.ncbi.nlm.nih.gov/pubmed/26347858
http://dx.doi.org/10.3389/fpubh.2015.00202
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