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Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference

The Ari peoples of Ethiopia are comprised of different occupational groups that can be distinguished genetically, with Ari Cultivators and the socially marginalised Ari Blacksmiths recently shown to have a similar level of genetic differentiation between them (F (ST) ≈ 0.023 − 0.04) as that observed...

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Autores principales: van Dorp, Lucy, Balding, David, Myers, Simon, Pagani, Luca, Tyler-Smith, Chris, Bekele, Endashaw, Tarekegn, Ayele, Thomas, Mark G., Bradman, Neil, Hellenthal, Garrett
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4546361/
https://www.ncbi.nlm.nih.gov/pubmed/26291793
http://dx.doi.org/10.1371/journal.pgen.1005397
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author van Dorp, Lucy
Balding, David
Myers, Simon
Pagani, Luca
Tyler-Smith, Chris
Bekele, Endashaw
Tarekegn, Ayele
Thomas, Mark G.
Bradman, Neil
Hellenthal, Garrett
author_facet van Dorp, Lucy
Balding, David
Myers, Simon
Pagani, Luca
Tyler-Smith, Chris
Bekele, Endashaw
Tarekegn, Ayele
Thomas, Mark G.
Bradman, Neil
Hellenthal, Garrett
author_sort van Dorp, Lucy
collection PubMed
description The Ari peoples of Ethiopia are comprised of different occupational groups that can be distinguished genetically, with Ari Cultivators and the socially marginalised Ari Blacksmiths recently shown to have a similar level of genetic differentiation between them (F (ST) ≈ 0.023 − 0.04) as that observed among multiple ethnic groups sampled throughout Ethiopia. Anthropologists have proposed two competing theories to explain the origins of the Ari Blacksmiths as (i) remnants of a population that inhabited Ethiopia prior to the arrival of agriculturists (e.g. Cultivators), or (ii) relatively recently related to the Cultivators but presently marginalized in the community due to their trade. Two recent studies by different groups analysed genome-wide DNA from samples of Ari Blacksmiths and Cultivators and suggested that genetic patterns between the two groups were more consistent with model (i) and subsequent assimilation of the indigenous peoples into the expanding agriculturalist community. We analysed the same samples using approaches designed to attenuate signals of genetic differentiation that are attributable to allelic drift within a population. By doing so, we provide evidence that the genetic differences between Ari Blacksmiths and Cultivators can be entirely explained by bottleneck effects consistent with hypothesis (ii). This finding serves as both a cautionary tale about interpreting results from unsupervised clustering algorithms, and suggests that social constructions are contributing directly to genetic differentiation over a relatively short time period among previously genetically similar groups.
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spelling pubmed-45463612015-08-26 Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference van Dorp, Lucy Balding, David Myers, Simon Pagani, Luca Tyler-Smith, Chris Bekele, Endashaw Tarekegn, Ayele Thomas, Mark G. Bradman, Neil Hellenthal, Garrett PLoS Genet Research Article The Ari peoples of Ethiopia are comprised of different occupational groups that can be distinguished genetically, with Ari Cultivators and the socially marginalised Ari Blacksmiths recently shown to have a similar level of genetic differentiation between them (F (ST) ≈ 0.023 − 0.04) as that observed among multiple ethnic groups sampled throughout Ethiopia. Anthropologists have proposed two competing theories to explain the origins of the Ari Blacksmiths as (i) remnants of a population that inhabited Ethiopia prior to the arrival of agriculturists (e.g. Cultivators), or (ii) relatively recently related to the Cultivators but presently marginalized in the community due to their trade. Two recent studies by different groups analysed genome-wide DNA from samples of Ari Blacksmiths and Cultivators and suggested that genetic patterns between the two groups were more consistent with model (i) and subsequent assimilation of the indigenous peoples into the expanding agriculturalist community. We analysed the same samples using approaches designed to attenuate signals of genetic differentiation that are attributable to allelic drift within a population. By doing so, we provide evidence that the genetic differences between Ari Blacksmiths and Cultivators can be entirely explained by bottleneck effects consistent with hypothesis (ii). This finding serves as both a cautionary tale about interpreting results from unsupervised clustering algorithms, and suggests that social constructions are contributing directly to genetic differentiation over a relatively short time period among previously genetically similar groups. Public Library of Science 2015-08-20 /pmc/articles/PMC4546361/ /pubmed/26291793 http://dx.doi.org/10.1371/journal.pgen.1005397 Text en © 2015 van Dorp et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
van Dorp, Lucy
Balding, David
Myers, Simon
Pagani, Luca
Tyler-Smith, Chris
Bekele, Endashaw
Tarekegn, Ayele
Thomas, Mark G.
Bradman, Neil
Hellenthal, Garrett
Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title_full Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title_fullStr Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title_full_unstemmed Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title_short Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference
title_sort evidence for a common origin of blacksmiths and cultivators in the ethiopian ari within the last 4500 years: lessons for clustering-based inference
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4546361/
https://www.ncbi.nlm.nih.gov/pubmed/26291793
http://dx.doi.org/10.1371/journal.pgen.1005397
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