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Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules

The crystallization behavior of methylthio- or methylsulfonyl-containing spacer extended Z,Z-bis-ene–yne molecules capped with trimethylsilyl groups obtained by (tandem) thiophene ring fragmentation and of two non-spacer extended analogs were investigated. The rigid and linear molecules generally cr...

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Autores principales: Lumpi, Daniel, Kautny, Paul, Stöger, Berthold, Fröhlich, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4547826/
https://www.ncbi.nlm.nih.gov/pubmed/26306200
http://dx.doi.org/10.1107/S2052252515011665
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author Lumpi, Daniel
Kautny, Paul
Stöger, Berthold
Fröhlich, Johannes
author_facet Lumpi, Daniel
Kautny, Paul
Stöger, Berthold
Fröhlich, Johannes
author_sort Lumpi, Daniel
collection PubMed
description The crystallization behavior of methylthio- or methylsulfonyl-containing spacer extended Z,Z-bis-ene–yne molecules capped with trimethylsilyl groups obtained by (tandem) thiophene ring fragmentation and of two non-spacer extended analogs were investigated. The rigid and linear molecules generally crystallized in layers whereby the flexibility of the layer interfaces formed by the silyl groups leads to a remarkably rich crystal chemistry. The molecules with benzene and thiophene spacers both crystallized with C2/c symmetry and can be considered as merotypes. Increasing the steric bulk of the core by introduction of ethylenedioxythiophene (EDOT) gave a structure incommensurately modulated in the [010] direction. Further increase of steric demand in the case of a dimethoxythiophene restored periodicity along [010] but resulted in a doubling of the c vector. Two different polytypes were observed, which feature geometrically different layer interfaces (non-OD, order–disorder, polytypes), one with a high stacking fault probability. Oxidation of the methylthio groups of the benzene-based molecule to methylsulfonyl groups led to three polymorphs (two temperature-dependent), which were analyzed by Hirshfeld surface d (e)/d (i) fingerprint plots. The analogously oxidized EDOT-based molecule crystallized as systematic twins owing to its OD polytypism. Shortening of the backbone by removal of the aryl core resulted in an enantiomorphic structure and a further shortening by removal of a methylthio-ene fragment again in a systematically twinned OD polytype.
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spelling pubmed-45478262015-08-24 Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules Lumpi, Daniel Kautny, Paul Stöger, Berthold Fröhlich, Johannes IUCrJ Research Papers The crystallization behavior of methylthio- or methylsulfonyl-containing spacer extended Z,Z-bis-ene–yne molecules capped with trimethylsilyl groups obtained by (tandem) thiophene ring fragmentation and of two non-spacer extended analogs were investigated. The rigid and linear molecules generally crystallized in layers whereby the flexibility of the layer interfaces formed by the silyl groups leads to a remarkably rich crystal chemistry. The molecules with benzene and thiophene spacers both crystallized with C2/c symmetry and can be considered as merotypes. Increasing the steric bulk of the core by introduction of ethylenedioxythiophene (EDOT) gave a structure incommensurately modulated in the [010] direction. Further increase of steric demand in the case of a dimethoxythiophene restored periodicity along [010] but resulted in a doubling of the c vector. Two different polytypes were observed, which feature geometrically different layer interfaces (non-OD, order–disorder, polytypes), one with a high stacking fault probability. Oxidation of the methylthio groups of the benzene-based molecule to methylsulfonyl groups led to three polymorphs (two temperature-dependent), which were analyzed by Hirshfeld surface d (e)/d (i) fingerprint plots. The analogously oxidized EDOT-based molecule crystallized as systematic twins owing to its OD polytypism. Shortening of the backbone by removal of the aryl core resulted in an enantiomorphic structure and a further shortening by removal of a methylthio-ene fragment again in a systematically twinned OD polytype. International Union of Crystallography 2015-08-20 /pmc/articles/PMC4547826/ /pubmed/26306200 http://dx.doi.org/10.1107/S2052252515011665 Text en © Daniel Lumpi et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Lumpi, Daniel
Kautny, Paul
Stöger, Berthold
Fröhlich, Johannes
Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title_full Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title_fullStr Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title_full_unstemmed Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title_short Crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
title_sort crystal chemistry of layered structures formed by linear rigid silyl-capped molecules
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4547826/
https://www.ncbi.nlm.nih.gov/pubmed/26306200
http://dx.doi.org/10.1107/S2052252515011665
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