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Time resolution dependence of information measures for spiking neurons: scaling and universality
The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint processes. A first step toward that larger goal is to develo...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4551861/ https://www.ncbi.nlm.nih.gov/pubmed/26379538 http://dx.doi.org/10.3389/fncom.2015.00105 |
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author | Marzen, Sarah E. DeWeese, Michael R. Crutchfield, James P. |
author_facet | Marzen, Sarah E. DeWeese, Michael R. Crutchfield, James P. |
author_sort | Marzen, Sarah E. |
collection | PubMed |
description | The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint processes. A first step toward that larger goal is to develop information measures for individual output processes, including information generation (entropy rate), stored information (statistical complexity), predictable information (excess entropy), and active information accumulation (bound information rate). We calculate these for spike trains generated by a variety of noise-driven integrate-and-fire neurons as a function of time resolution and for alternating renewal processes. We show that their time-resolution dependence reveals coarse-grained structural properties of interspike interval statistics; e.g., τ-entropy rates that diverge less quickly than the firing rate indicated by interspike interval correlations. We also find evidence that the excess entropy and regularized statistical complexity of different types of integrate-and-fire neurons are universal in the continuous-time limit in the sense that they do not depend on mechanism details. This suggests a surprising simplicity in the spike trains generated by these model neurons. Interestingly, neurons with gamma-distributed ISIs and neurons whose spike trains are alternating renewal processes do not fall into the same universality class. These results lead to two conclusions. First, the dependence of information measures on time resolution reveals mechanistic details about spike train generation. Second, information measures can be used as model selection tools for analyzing spike train processes. |
format | Online Article Text |
id | pubmed-4551861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-45518612015-09-14 Time resolution dependence of information measures for spiking neurons: scaling and universality Marzen, Sarah E. DeWeese, Michael R. Crutchfield, James P. Front Comput Neurosci Neuroscience The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint processes. A first step toward that larger goal is to develop information measures for individual output processes, including information generation (entropy rate), stored information (statistical complexity), predictable information (excess entropy), and active information accumulation (bound information rate). We calculate these for spike trains generated by a variety of noise-driven integrate-and-fire neurons as a function of time resolution and for alternating renewal processes. We show that their time-resolution dependence reveals coarse-grained structural properties of interspike interval statistics; e.g., τ-entropy rates that diverge less quickly than the firing rate indicated by interspike interval correlations. We also find evidence that the excess entropy and regularized statistical complexity of different types of integrate-and-fire neurons are universal in the continuous-time limit in the sense that they do not depend on mechanism details. This suggests a surprising simplicity in the spike trains generated by these model neurons. Interestingly, neurons with gamma-distributed ISIs and neurons whose spike trains are alternating renewal processes do not fall into the same universality class. These results lead to two conclusions. First, the dependence of information measures on time resolution reveals mechanistic details about spike train generation. Second, information measures can be used as model selection tools for analyzing spike train processes. Frontiers Media S.A. 2015-08-28 /pmc/articles/PMC4551861/ /pubmed/26379538 http://dx.doi.org/10.3389/fncom.2015.00105 Text en Copyright © 2015 Marzen, DeWeese and Crutchfield. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Marzen, Sarah E. DeWeese, Michael R. Crutchfield, James P. Time resolution dependence of information measures for spiking neurons: scaling and universality |
title | Time resolution dependence of information measures for spiking neurons: scaling and universality |
title_full | Time resolution dependence of information measures for spiking neurons: scaling and universality |
title_fullStr | Time resolution dependence of information measures for spiking neurons: scaling and universality |
title_full_unstemmed | Time resolution dependence of information measures for spiking neurons: scaling and universality |
title_short | Time resolution dependence of information measures for spiking neurons: scaling and universality |
title_sort | time resolution dependence of information measures for spiking neurons: scaling and universality |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4551861/ https://www.ncbi.nlm.nih.gov/pubmed/26379538 http://dx.doi.org/10.3389/fncom.2015.00105 |
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