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Identifying Cognitive States Using Regularity Partitions

Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures...

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Detalles Bibliográficos
Autores principales: Pappas, Ioannis, Pardalos, Panos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552750/
https://www.ncbi.nlm.nih.gov/pubmed/26317983
http://dx.doi.org/10.1371/journal.pone.0137012
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author Pappas, Ioannis
Pardalos, Panos
author_facet Pappas, Ioannis
Pardalos, Panos
author_sort Pappas, Ioannis
collection PubMed
description Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures of correlation. Identifying cognitive states based on fMRI data is connected with recording voxel activity over a certain time interval. Using this information, network and machine learning techniques can be applied to discriminate the cognitive states of the subjects by exploring different features of data. In this work we wish to describe and understand the organization of brain connectivity networks under cognitive tasks. In particular, we use a regularity partitioning algorithm that finds clusters of vertices such that they all behave with each other almost like random bipartite graphs. Based on the random approximation of the graph, we calculate a lower bound on the number of triangles as well as the expectation of the distribution of the edges in each subject and state. We investigate the results by comparing them to the state of the art algorithms for exploring connectivity and we argue that during epochs that the subject is exposed to stimulus, the inspected part of the brain is organized in an efficient way that enables enhanced functionality.
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spelling pubmed-45527502015-09-10 Identifying Cognitive States Using Regularity Partitions Pappas, Ioannis Pardalos, Panos PLoS One Research Article Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures of correlation. Identifying cognitive states based on fMRI data is connected with recording voxel activity over a certain time interval. Using this information, network and machine learning techniques can be applied to discriminate the cognitive states of the subjects by exploring different features of data. In this work we wish to describe and understand the organization of brain connectivity networks under cognitive tasks. In particular, we use a regularity partitioning algorithm that finds clusters of vertices such that they all behave with each other almost like random bipartite graphs. Based on the random approximation of the graph, we calculate a lower bound on the number of triangles as well as the expectation of the distribution of the edges in each subject and state. We investigate the results by comparing them to the state of the art algorithms for exploring connectivity and we argue that during epochs that the subject is exposed to stimulus, the inspected part of the brain is organized in an efficient way that enables enhanced functionality. Public Library of Science 2015-08-28 /pmc/articles/PMC4552750/ /pubmed/26317983 http://dx.doi.org/10.1371/journal.pone.0137012 Text en © 2015 Pappas, Pardalos http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Pappas, Ioannis
Pardalos, Panos
Identifying Cognitive States Using Regularity Partitions
title Identifying Cognitive States Using Regularity Partitions
title_full Identifying Cognitive States Using Regularity Partitions
title_fullStr Identifying Cognitive States Using Regularity Partitions
title_full_unstemmed Identifying Cognitive States Using Regularity Partitions
title_short Identifying Cognitive States Using Regularity Partitions
title_sort identifying cognitive states using regularity partitions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552750/
https://www.ncbi.nlm.nih.gov/pubmed/26317983
http://dx.doi.org/10.1371/journal.pone.0137012
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