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Identifying Cognitive States Using Regularity Partitions
Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552750/ https://www.ncbi.nlm.nih.gov/pubmed/26317983 http://dx.doi.org/10.1371/journal.pone.0137012 |
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author | Pappas, Ioannis Pardalos, Panos |
author_facet | Pappas, Ioannis Pardalos, Panos |
author_sort | Pappas, Ioannis |
collection | PubMed |
description | Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures of correlation. Identifying cognitive states based on fMRI data is connected with recording voxel activity over a certain time interval. Using this information, network and machine learning techniques can be applied to discriminate the cognitive states of the subjects by exploring different features of data. In this work we wish to describe and understand the organization of brain connectivity networks under cognitive tasks. In particular, we use a regularity partitioning algorithm that finds clusters of vertices such that they all behave with each other almost like random bipartite graphs. Based on the random approximation of the graph, we calculate a lower bound on the number of triangles as well as the expectation of the distribution of the edges in each subject and state. We investigate the results by comparing them to the state of the art algorithms for exploring connectivity and we argue that during epochs that the subject is exposed to stimulus, the inspected part of the brain is organized in an efficient way that enables enhanced functionality. |
format | Online Article Text |
id | pubmed-4552750 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45527502015-09-10 Identifying Cognitive States Using Regularity Partitions Pappas, Ioannis Pardalos, Panos PLoS One Research Article Functional Magnetic Resonance (fMRI) data can be used to depict functional connectivity of the brain. Standard techniques have been developed to construct brain networks from this data; typically nodes are considered as voxels or sets of voxels with weighted edges between them representing measures of correlation. Identifying cognitive states based on fMRI data is connected with recording voxel activity over a certain time interval. Using this information, network and machine learning techniques can be applied to discriminate the cognitive states of the subjects by exploring different features of data. In this work we wish to describe and understand the organization of brain connectivity networks under cognitive tasks. In particular, we use a regularity partitioning algorithm that finds clusters of vertices such that they all behave with each other almost like random bipartite graphs. Based on the random approximation of the graph, we calculate a lower bound on the number of triangles as well as the expectation of the distribution of the edges in each subject and state. We investigate the results by comparing them to the state of the art algorithms for exploring connectivity and we argue that during epochs that the subject is exposed to stimulus, the inspected part of the brain is organized in an efficient way that enables enhanced functionality. Public Library of Science 2015-08-28 /pmc/articles/PMC4552750/ /pubmed/26317983 http://dx.doi.org/10.1371/journal.pone.0137012 Text en © 2015 Pappas, Pardalos http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Pappas, Ioannis Pardalos, Panos Identifying Cognitive States Using Regularity Partitions |
title | Identifying Cognitive States Using Regularity Partitions |
title_full | Identifying Cognitive States Using Regularity Partitions |
title_fullStr | Identifying Cognitive States Using Regularity Partitions |
title_full_unstemmed | Identifying Cognitive States Using Regularity Partitions |
title_short | Identifying Cognitive States Using Regularity Partitions |
title_sort | identifying cognitive states using regularity partitions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552750/ https://www.ncbi.nlm.nih.gov/pubmed/26317983 http://dx.doi.org/10.1371/journal.pone.0137012 |
work_keys_str_mv | AT pappasioannis identifyingcognitivestatesusingregularitypartitions AT pardalospanos identifyingcognitivestatesusingregularitypartitions |