Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans

Two sets of LSGs were identified using BLAST: Caenorhabditis elegans species-specific genes (SSGs, 1423), and Caenorhabditis genus-specific genes (GSGs, 4539). The data contained in this article show SSGs and GSGs have significant differences in evolution and that most of them were formed by gene du...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhou, Kun, Huang, Beibei, Zou, Ming, Lu, Dandan, He, Shunping, Wang, Guoxiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Data Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552949/
https://www.ncbi.nlm.nih.gov/pubmed/26442285
http://dx.doi.org/10.1016/j.dib.2015.07.032
_version_ 1782387820918210560
author Zhou, Kun
Huang, Beibei
Zou, Ming
Lu, Dandan
He, Shunping
Wang, Guoxiu
author_facet Zhou, Kun
Huang, Beibei
Zou, Ming
Lu, Dandan
He, Shunping
Wang, Guoxiu
author_sort Zhou, Kun
collection PubMed
description Two sets of LSGs were identified using BLAST: Caenorhabditis elegans species-specific genes (SSGs, 1423), and Caenorhabditis genus-specific genes (GSGs, 4539). The data contained in this article show SSGs and GSGs have significant differences in evolution and that most of them were formed by gene duplication and integration of transposable elements (TEs). Subsequent observation of temporal expression and protein function presents that many SSGs and GSGs are expressed and that genes involved with sex determination, specific stress, immune response, and morphogenesis are most represented. The data are related to research article “Genome-wide identification of lineage-specific genes within Caenorhabditis elegans” in Journal of Genomics [1].
format Online
Article
Text
id pubmed-4552949
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-45529492015-10-05 Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans Zhou, Kun Huang, Beibei Zou, Ming Lu, Dandan He, Shunping Wang, Guoxiu Data Brief Data Article Two sets of LSGs were identified using BLAST: Caenorhabditis elegans species-specific genes (SSGs, 1423), and Caenorhabditis genus-specific genes (GSGs, 4539). The data contained in this article show SSGs and GSGs have significant differences in evolution and that most of them were formed by gene duplication and integration of transposable elements (TEs). Subsequent observation of temporal expression and protein function presents that many SSGs and GSGs are expressed and that genes involved with sex determination, specific stress, immune response, and morphogenesis are most represented. The data are related to research article “Genome-wide identification of lineage-specific genes within Caenorhabditis elegans” in Journal of Genomics [1]. Elsevier 2015-08-03 /pmc/articles/PMC4552949/ /pubmed/26442285 http://dx.doi.org/10.1016/j.dib.2015.07.032 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Zhou, Kun
Huang, Beibei
Zou, Ming
Lu, Dandan
He, Shunping
Wang, Guoxiu
Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title_full Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title_fullStr Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title_full_unstemmed Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title_short Data in support of genome-wide identification of lineage-specific genes within Caenorhabditis elegans
title_sort data in support of genome-wide identification of lineage-specific genes within caenorhabditis elegans
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4552949/
https://www.ncbi.nlm.nih.gov/pubmed/26442285
http://dx.doi.org/10.1016/j.dib.2015.07.032
work_keys_str_mv AT zhoukun datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans
AT huangbeibei datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans
AT zouming datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans
AT ludandan datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans
AT heshunping datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans
AT wangguoxiu datainsupportofgenomewideidentificationoflineagespecificgeneswithincaenorhabditiselegans

Ejemplares similares