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Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers

Metagenomics analysis has been applied to identify the dominant anaerobic microbial consortium of the carbon monoxide (CO) oxidizers in anaerobic sludge. Reads from the hypervariable V6 region in the bacterial 16s rDNA were aligned and finally clustered into operational taxonomic units (OTUs). The O...

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Autores principales: Guo, Ying, Xu, Jingliang, Yuan, Zhenhong, Li, Xiekun, Zhou, Weizheng, Xu, Huijuan, Liang, Cuiyi, Zhang, Yu, Zhuang, Xinshu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4554472/
https://www.ncbi.nlm.nih.gov/pubmed/25874504
http://dx.doi.org/10.1111/1751-7915.12283
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author Guo, Ying
Xu, Jingliang
Yuan, Zhenhong
Li, Xiekun
Zhou, Weizheng
Xu, Huijuan
Liang, Cuiyi
Zhang, Yu
Zhuang, Xinshu
author_facet Guo, Ying
Xu, Jingliang
Yuan, Zhenhong
Li, Xiekun
Zhou, Weizheng
Xu, Huijuan
Liang, Cuiyi
Zhang, Yu
Zhuang, Xinshu
author_sort Guo, Ying
collection PubMed
description Metagenomics analysis has been applied to identify the dominant anaerobic microbial consortium of the carbon monoxide (CO) oxidizers in anaerobic sludge. Reads from the hypervariable V6 region in the bacterial 16s rDNA were aligned and finally clustered into operational taxonomic units (OTUs). The OTUs from different stages in anaerobic CO condition were classified. Alphaproteobacteria, clostridia, betaproteobacteria and actinobacteria were the most abundant groups, while alphaproteobacteria, betaproteobacteria and actinobacteria were variable groups. CO consumption and production efficiency of the microbial consortium were studied. Semi-continuous trials showed that these anaerobic CO oxidizers formed a stable microbial community, and the CO conversion rate was at over 84%, with the highest CO consumption activity of 28.9 mmol CO/g VSS●day and methane production activity at 7.6 mmol CH(4)/g VSS●day during six cycles.
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spelling pubmed-45544722015-09-04 Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers Guo, Ying Xu, Jingliang Yuan, Zhenhong Li, Xiekun Zhou, Weizheng Xu, Huijuan Liang, Cuiyi Zhang, Yu Zhuang, Xinshu Microb Biotechnol Research Articles Metagenomics analysis has been applied to identify the dominant anaerobic microbial consortium of the carbon monoxide (CO) oxidizers in anaerobic sludge. Reads from the hypervariable V6 region in the bacterial 16s rDNA were aligned and finally clustered into operational taxonomic units (OTUs). The OTUs from different stages in anaerobic CO condition were classified. Alphaproteobacteria, clostridia, betaproteobacteria and actinobacteria were the most abundant groups, while alphaproteobacteria, betaproteobacteria and actinobacteria were variable groups. CO consumption and production efficiency of the microbial consortium were studied. Semi-continuous trials showed that these anaerobic CO oxidizers formed a stable microbial community, and the CO conversion rate was at over 84%, with the highest CO consumption activity of 28.9 mmol CO/g VSS●day and methane production activity at 7.6 mmol CH(4)/g VSS●day during six cycles. John Wiley & Sons, Ltd 2015-09 2015-04-15 /pmc/articles/PMC4554472/ /pubmed/25874504 http://dx.doi.org/10.1111/1751-7915.12283 Text en Journal compilation © 2015 John Wiley & Sons Ltd and Society for Applied Microbiology http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Guo, Ying
Xu, Jingliang
Yuan, Zhenhong
Li, Xiekun
Zhou, Weizheng
Xu, Huijuan
Liang, Cuiyi
Zhang, Yu
Zhuang, Xinshu
Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title_full Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title_fullStr Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title_full_unstemmed Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title_short Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers
title_sort metagenomic analysis for the microbial consortium of anaerobic co oxidizers
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4554472/
https://www.ncbi.nlm.nih.gov/pubmed/25874504
http://dx.doi.org/10.1111/1751-7915.12283
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