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The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice
Iron plaque is a strong adsorbent on rice roots, acting as a barrier to prevent metal uptake by rice. However, the role of root iron plaque microbes in governing metal redox cycling and metal bioavailability is unknown. In this study, the microbial community structure on the iron plaque of rice root...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555042/ https://www.ncbi.nlm.nih.gov/pubmed/26324258 http://dx.doi.org/10.1038/srep13611 |
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author | Hu, Min Li, Fangbai Liu, Chuanping Wu, Weijian |
author_facet | Hu, Min Li, Fangbai Liu, Chuanping Wu, Weijian |
author_sort | Hu, Min |
collection | PubMed |
description | Iron plaque is a strong adsorbent on rice roots, acting as a barrier to prevent metal uptake by rice. However, the role of root iron plaque microbes in governing metal redox cycling and metal bioavailability is unknown. In this study, the microbial community structure on the iron plaque of rice roots from an arsenic-contaminated paddy soil was explored using high-throughput next-generation sequencing. The microbial composition and diversity of the root iron plaque were significantly different from those of the bulk and rhizosphere soils. Using the aoxB gene as an identifying marker, we determined that the arsenite-oxidizing microbiota on the iron plaque was dominated by Acidovorax and Hydrogenophaga-affiliated bacteria. More importantly, the abundance of arsenite-oxidizing bacteria (AsOB) on the root iron plaque was significantly negatively correlated with the arsenic concentration in the rice root, straw and grain, indicating that the microbes on the iron plaque, particularly the AsOB, were actively catalyzing arsenic transformation and greatly influencing metal uptake by rice. This exploratory research represents a preliminary examination of the microbial community structure of the root iron plaque formed under arsenic pollution and emphasizes the importance of the root iron plaque environment in arsenic biogeochemical cycling compared with the soil-rhizosphere biotope. |
format | Online Article Text |
id | pubmed-4555042 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-45550422015-09-11 The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice Hu, Min Li, Fangbai Liu, Chuanping Wu, Weijian Sci Rep Article Iron plaque is a strong adsorbent on rice roots, acting as a barrier to prevent metal uptake by rice. However, the role of root iron plaque microbes in governing metal redox cycling and metal bioavailability is unknown. In this study, the microbial community structure on the iron plaque of rice roots from an arsenic-contaminated paddy soil was explored using high-throughput next-generation sequencing. The microbial composition and diversity of the root iron plaque were significantly different from those of the bulk and rhizosphere soils. Using the aoxB gene as an identifying marker, we determined that the arsenite-oxidizing microbiota on the iron plaque was dominated by Acidovorax and Hydrogenophaga-affiliated bacteria. More importantly, the abundance of arsenite-oxidizing bacteria (AsOB) on the root iron plaque was significantly negatively correlated with the arsenic concentration in the rice root, straw and grain, indicating that the microbes on the iron plaque, particularly the AsOB, were actively catalyzing arsenic transformation and greatly influencing metal uptake by rice. This exploratory research represents a preliminary examination of the microbial community structure of the root iron plaque formed under arsenic pollution and emphasizes the importance of the root iron plaque environment in arsenic biogeochemical cycling compared with the soil-rhizosphere biotope. Nature Publishing Group 2015-09-01 /pmc/articles/PMC4555042/ /pubmed/26324258 http://dx.doi.org/10.1038/srep13611 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Hu, Min Li, Fangbai Liu, Chuanping Wu, Weijian The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title | The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title_full | The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title_fullStr | The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title_full_unstemmed | The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title_short | The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
title_sort | diversity and abundance of as(iii) oxidizers on root iron plaque is critical for arsenic bioavailability to rice |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555042/ https://www.ncbi.nlm.nih.gov/pubmed/26324258 http://dx.doi.org/10.1038/srep13611 |
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