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An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates

Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated...

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Autores principales: Brassey, Charlotte A., Gardiner, James D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society Publishing 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555864/
https://www.ncbi.nlm.nih.gov/pubmed/26361559
http://dx.doi.org/10.1098/rsos.150302
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author Brassey, Charlotte A.
Gardiner, James D.
author_facet Brassey, Charlotte A.
Gardiner, James D.
author_sort Brassey, Charlotte A.
collection PubMed
description Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated skeletal elements, volumetric techniques are increasingly applied to fossils when skeletal completeness allows. We apply a new ‘alpha shapes’ (α-shapes) algorithm to volumetric mass estimation in quadrupedal mammals. α-shapes are defined by: (i) the underlying skeletal structure to which they are fitted; and (ii) the value α, determining the refinement of fit. For a given skeleton, a range of α-shapes may be fitted around the individual, spanning from very coarse to very fine. We fit α-shapes to three-dimensional models of extant mammals and calculate volumes, which are regressed against mass to generate predictive equations. Our optimal model is characterized by a high correlation coefficient and mean square error (r(2)=0.975, m.s.e.=0.025). When applied to the woolly mammoth (Mammuthus primigenius) and giant ground sloth (Megatherium americanum), we reconstruct masses of 3635 and 3706 kg, respectively. We consider α-shapes an improvement upon previous techniques as resulting volumes are less sensitive to uncertainties in skeletal reconstructions, and do not require manual separation of body segments from skeletons.
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spelling pubmed-45558642015-09-10 An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates Brassey, Charlotte A. Gardiner, James D. R Soc Open Sci Biology (Whole Organism) Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated skeletal elements, volumetric techniques are increasingly applied to fossils when skeletal completeness allows. We apply a new ‘alpha shapes’ (α-shapes) algorithm to volumetric mass estimation in quadrupedal mammals. α-shapes are defined by: (i) the underlying skeletal structure to which they are fitted; and (ii) the value α, determining the refinement of fit. For a given skeleton, a range of α-shapes may be fitted around the individual, spanning from very coarse to very fine. We fit α-shapes to three-dimensional models of extant mammals and calculate volumes, which are regressed against mass to generate predictive equations. Our optimal model is characterized by a high correlation coefficient and mean square error (r(2)=0.975, m.s.e.=0.025). When applied to the woolly mammoth (Mammuthus primigenius) and giant ground sloth (Megatherium americanum), we reconstruct masses of 3635 and 3706 kg, respectively. We consider α-shapes an improvement upon previous techniques as resulting volumes are less sensitive to uncertainties in skeletal reconstructions, and do not require manual separation of body segments from skeletons. The Royal Society Publishing 2015-08-19 /pmc/articles/PMC4555864/ /pubmed/26361559 http://dx.doi.org/10.1098/rsos.150302 Text en © 2015 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Biology (Whole Organism)
Brassey, Charlotte A.
Gardiner, James D.
An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title_full An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title_fullStr An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title_full_unstemmed An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title_short An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
title_sort advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
topic Biology (Whole Organism)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555864/
https://www.ncbi.nlm.nih.gov/pubmed/26361559
http://dx.doi.org/10.1098/rsos.150302
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