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An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates
Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555864/ https://www.ncbi.nlm.nih.gov/pubmed/26361559 http://dx.doi.org/10.1098/rsos.150302 |
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author | Brassey, Charlotte A. Gardiner, James D. |
author_facet | Brassey, Charlotte A. Gardiner, James D. |
author_sort | Brassey, Charlotte A. |
collection | PubMed |
description | Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated skeletal elements, volumetric techniques are increasingly applied to fossils when skeletal completeness allows. We apply a new ‘alpha shapes’ (α-shapes) algorithm to volumetric mass estimation in quadrupedal mammals. α-shapes are defined by: (i) the underlying skeletal structure to which they are fitted; and (ii) the value α, determining the refinement of fit. For a given skeleton, a range of α-shapes may be fitted around the individual, spanning from very coarse to very fine. We fit α-shapes to three-dimensional models of extant mammals and calculate volumes, which are regressed against mass to generate predictive equations. Our optimal model is characterized by a high correlation coefficient and mean square error (r(2)=0.975, m.s.e.=0.025). When applied to the woolly mammoth (Mammuthus primigenius) and giant ground sloth (Megatherium americanum), we reconstruct masses of 3635 and 3706 kg, respectively. We consider α-shapes an improvement upon previous techniques as resulting volumes are less sensitive to uncertainties in skeletal reconstructions, and do not require manual separation of body segments from skeletons. |
format | Online Article Text |
id | pubmed-4555864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-45558642015-09-10 An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates Brassey, Charlotte A. Gardiner, James D. R Soc Open Sci Biology (Whole Organism) Body mass is a fundamental physical property of an individual and has enormous bearing upon ecology and physiology. Generating reliable estimates for body mass is therefore a necessary step in many palaeontological studies. Whilst early reconstructions of mass in extinct species relied upon isolated skeletal elements, volumetric techniques are increasingly applied to fossils when skeletal completeness allows. We apply a new ‘alpha shapes’ (α-shapes) algorithm to volumetric mass estimation in quadrupedal mammals. α-shapes are defined by: (i) the underlying skeletal structure to which they are fitted; and (ii) the value α, determining the refinement of fit. For a given skeleton, a range of α-shapes may be fitted around the individual, spanning from very coarse to very fine. We fit α-shapes to three-dimensional models of extant mammals and calculate volumes, which are regressed against mass to generate predictive equations. Our optimal model is characterized by a high correlation coefficient and mean square error (r(2)=0.975, m.s.e.=0.025). When applied to the woolly mammoth (Mammuthus primigenius) and giant ground sloth (Megatherium americanum), we reconstruct masses of 3635 and 3706 kg, respectively. We consider α-shapes an improvement upon previous techniques as resulting volumes are less sensitive to uncertainties in skeletal reconstructions, and do not require manual separation of body segments from skeletons. The Royal Society Publishing 2015-08-19 /pmc/articles/PMC4555864/ /pubmed/26361559 http://dx.doi.org/10.1098/rsos.150302 Text en © 2015 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Biology (Whole Organism) Brassey, Charlotte A. Gardiner, James D. An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title | An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title_full | An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title_fullStr | An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title_full_unstemmed | An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title_short | An advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
title_sort | advanced shape-fitting algorithm applied to quadrupedal mammals: improving volumetric mass estimates |
topic | Biology (Whole Organism) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4555864/ https://www.ncbi.nlm.nih.gov/pubmed/26361559 http://dx.doi.org/10.1098/rsos.150302 |
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