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Sparse Zero-Sum Games as Stable Functional Feature Selection
In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4556702/ https://www.ncbi.nlm.nih.gov/pubmed/26325268 http://dx.doi.org/10.1371/journal.pone.0134683 |
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author | Sokolovska, Nataliya Teytaud, Olivier Rizkalla, Salwa Clément, Karine Zucker, Jean-Daniel |
author_facet | Sokolovska, Nataliya Teytaud, Olivier Rizkalla, Salwa Clément, Karine Zucker, Jean-Daniel |
author_sort | Sokolovska, Nataliya |
collection | PubMed |
description | In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In this contribution, we propose a framework based on a sparse zero-sum game which performs a stable functional feature selection. In particular, the approach is based on feature subsets ranking by a thresholding stochastic bandit. We provide a theoretical analysis of the introduced algorithm. We illustrate by experiments on both synthetic and real complex data that the proposed method is competitive from the predictive and stability viewpoints. |
format | Online Article Text |
id | pubmed-4556702 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45567022015-09-10 Sparse Zero-Sum Games as Stable Functional Feature Selection Sokolovska, Nataliya Teytaud, Olivier Rizkalla, Salwa Clément, Karine Zucker, Jean-Daniel PLoS One Research Article In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In this contribution, we propose a framework based on a sparse zero-sum game which performs a stable functional feature selection. In particular, the approach is based on feature subsets ranking by a thresholding stochastic bandit. We provide a theoretical analysis of the introduced algorithm. We illustrate by experiments on both synthetic and real complex data that the proposed method is competitive from the predictive and stability viewpoints. Public Library of Science 2015-09-01 /pmc/articles/PMC4556702/ /pubmed/26325268 http://dx.doi.org/10.1371/journal.pone.0134683 Text en © 2015 Sokolovska et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sokolovska, Nataliya Teytaud, Olivier Rizkalla, Salwa Clément, Karine Zucker, Jean-Daniel Sparse Zero-Sum Games as Stable Functional Feature Selection |
title | Sparse Zero-Sum Games as Stable Functional Feature Selection |
title_full | Sparse Zero-Sum Games as Stable Functional Feature Selection |
title_fullStr | Sparse Zero-Sum Games as Stable Functional Feature Selection |
title_full_unstemmed | Sparse Zero-Sum Games as Stable Functional Feature Selection |
title_short | Sparse Zero-Sum Games as Stable Functional Feature Selection |
title_sort | sparse zero-sum games as stable functional feature selection |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4556702/ https://www.ncbi.nlm.nih.gov/pubmed/26325268 http://dx.doi.org/10.1371/journal.pone.0134683 |
work_keys_str_mv | AT sokolovskanataliya sparsezerosumgamesasstablefunctionalfeatureselection AT teytaudolivier sparsezerosumgamesasstablefunctionalfeatureselection AT rizkallasalwa sparsezerosumgamesasstablefunctionalfeatureselection AT sparsezerosumgamesasstablefunctionalfeatureselection AT clementkarine sparsezerosumgamesasstablefunctionalfeatureselection AT zuckerjeandaniel sparsezerosumgamesasstablefunctionalfeatureselection |