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Sparse Zero-Sum Games as Stable Functional Feature Selection

In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In...

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Autores principales: Sokolovska, Nataliya, Teytaud, Olivier, Rizkalla, Salwa, Clément, Karine, Zucker, Jean-Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4556702/
https://www.ncbi.nlm.nih.gov/pubmed/26325268
http://dx.doi.org/10.1371/journal.pone.0134683
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author Sokolovska, Nataliya
Teytaud, Olivier
Rizkalla, Salwa
Clément, Karine
Zucker, Jean-Daniel
author_facet Sokolovska, Nataliya
Teytaud, Olivier
Rizkalla, Salwa
Clément, Karine
Zucker, Jean-Daniel
author_sort Sokolovska, Nataliya
collection PubMed
description In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In this contribution, we propose a framework based on a sparse zero-sum game which performs a stable functional feature selection. In particular, the approach is based on feature subsets ranking by a thresholding stochastic bandit. We provide a theoretical analysis of the introduced algorithm. We illustrate by experiments on both synthetic and real complex data that the proposed method is competitive from the predictive and stability viewpoints.
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spelling pubmed-45567022015-09-10 Sparse Zero-Sum Games as Stable Functional Feature Selection Sokolovska, Nataliya Teytaud, Olivier Rizkalla, Salwa Clément, Karine Zucker, Jean-Daniel PLoS One Research Article In large-scale systems biology applications, features are structured in hidden functional categories whose predictive power is identical. Feature selection, therefore, can lead not only to a problem with a reduced dimensionality, but also reveal some knowledge on functional classes of variables. In this contribution, we propose a framework based on a sparse zero-sum game which performs a stable functional feature selection. In particular, the approach is based on feature subsets ranking by a thresholding stochastic bandit. We provide a theoretical analysis of the introduced algorithm. We illustrate by experiments on both synthetic and real complex data that the proposed method is competitive from the predictive and stability viewpoints. Public Library of Science 2015-09-01 /pmc/articles/PMC4556702/ /pubmed/26325268 http://dx.doi.org/10.1371/journal.pone.0134683 Text en © 2015 Sokolovska et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sokolovska, Nataliya
Teytaud, Olivier
Rizkalla, Salwa
Clément, Karine
Zucker, Jean-Daniel
Sparse Zero-Sum Games as Stable Functional Feature Selection
title Sparse Zero-Sum Games as Stable Functional Feature Selection
title_full Sparse Zero-Sum Games as Stable Functional Feature Selection
title_fullStr Sparse Zero-Sum Games as Stable Functional Feature Selection
title_full_unstemmed Sparse Zero-Sum Games as Stable Functional Feature Selection
title_short Sparse Zero-Sum Games as Stable Functional Feature Selection
title_sort sparse zero-sum games as stable functional feature selection
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4556702/
https://www.ncbi.nlm.nih.gov/pubmed/26325268
http://dx.doi.org/10.1371/journal.pone.0134683
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