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Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures

BACKGROUND: Refactoring microorganisms for efficient production of advanced biofuel such as n-butanol from a mixture of sugars in the cheap feedstock is a prerequisite to achieve economic feasibility in biorefinery. However, production of biofuel from inedible and cheap feedstock is highly challengi...

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Autores principales: Lim, Hyun Gyu, Lim, Jae Hyung, Jung, Gyoo Yeol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4559943/
https://www.ncbi.nlm.nih.gov/pubmed/26347006
http://dx.doi.org/10.1186/s13068-015-0327-7
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author Lim, Hyun Gyu
Lim, Jae Hyung
Jung, Gyoo Yeol
author_facet Lim, Hyun Gyu
Lim, Jae Hyung
Jung, Gyoo Yeol
author_sort Lim, Hyun Gyu
collection PubMed
description BACKGROUND: Refactoring microorganisms for efficient production of advanced biofuel such as n-butanol from a mixture of sugars in the cheap feedstock is a prerequisite to achieve economic feasibility in biorefinery. However, production of biofuel from inedible and cheap feedstock is highly challenging due to the slower utilization of biomass-driven sugars, arising from complex assimilation pathway, difficulties in amplification of biosynthetic pathways for heterologous metabolite, and redox imbalance caused by consuming intracellular reducing power to produce quite reduced biofuel. Even with these problems, the microorganisms should show robust production of biofuel to obtain industrial feasibility. Thus, refactoring microorganisms for efficient conversion is highly desirable in biofuel production. RESULTS: In this study, we engineered robust Escherichia coli to accomplish high production of n-butanol from galactose–glucose mixtures via the design of modular pathway, an efficient and systematic way, to reconstruct the entire metabolic pathway with many target genes. Three modular pathways designed using the predictable genetic elements were assembled for efficient galactose utilization, n-butanol production, and redox re-balancing to robustly produce n-butanol from a sugar mixture of galactose and glucose. Specifically, the engineered strain showed dramatically increased n-butanol production (3.3-fold increased to 6.2 g/L after 48-h fermentation) compared to the parental strain (1.9 g/L) in galactose-supplemented medium. Moreover, fermentation with mixtures of galactose and glucose at various ratios from 2:1 to 1:2 confirmed that our engineered strain was able to robustly produce n-butanol regardless of sugar composition with simultaneous utilization of galactose and glucose. CONCLUSIONS: Collectively, modular pathway engineering of metabolic network can be an effective approach in strain development for optimal biofuel production with cost-effective fermentable sugars. To the best of our knowledge, this study demonstrated the first and highest n-butanol production from galactose in E. coli. Moreover, robust production of n-butanol with sugar mixtures with variable composition would facilitate the economic feasibility of the microbial process using a mixture of sugars from cheap biomass in the near future. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-015-0327-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-45599432015-09-05 Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures Lim, Hyun Gyu Lim, Jae Hyung Jung, Gyoo Yeol Biotechnol Biofuels Research BACKGROUND: Refactoring microorganisms for efficient production of advanced biofuel such as n-butanol from a mixture of sugars in the cheap feedstock is a prerequisite to achieve economic feasibility in biorefinery. However, production of biofuel from inedible and cheap feedstock is highly challenging due to the slower utilization of biomass-driven sugars, arising from complex assimilation pathway, difficulties in amplification of biosynthetic pathways for heterologous metabolite, and redox imbalance caused by consuming intracellular reducing power to produce quite reduced biofuel. Even with these problems, the microorganisms should show robust production of biofuel to obtain industrial feasibility. Thus, refactoring microorganisms for efficient conversion is highly desirable in biofuel production. RESULTS: In this study, we engineered robust Escherichia coli to accomplish high production of n-butanol from galactose–glucose mixtures via the design of modular pathway, an efficient and systematic way, to reconstruct the entire metabolic pathway with many target genes. Three modular pathways designed using the predictable genetic elements were assembled for efficient galactose utilization, n-butanol production, and redox re-balancing to robustly produce n-butanol from a sugar mixture of galactose and glucose. Specifically, the engineered strain showed dramatically increased n-butanol production (3.3-fold increased to 6.2 g/L after 48-h fermentation) compared to the parental strain (1.9 g/L) in galactose-supplemented medium. Moreover, fermentation with mixtures of galactose and glucose at various ratios from 2:1 to 1:2 confirmed that our engineered strain was able to robustly produce n-butanol regardless of sugar composition with simultaneous utilization of galactose and glucose. CONCLUSIONS: Collectively, modular pathway engineering of metabolic network can be an effective approach in strain development for optimal biofuel production with cost-effective fermentable sugars. To the best of our knowledge, this study demonstrated the first and highest n-butanol production from galactose in E. coli. Moreover, robust production of n-butanol with sugar mixtures with variable composition would facilitate the economic feasibility of the microbial process using a mixture of sugars from cheap biomass in the near future. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-015-0327-7) contains supplementary material, which is available to authorized users. BioMed Central 2015-09-04 /pmc/articles/PMC4559943/ /pubmed/26347006 http://dx.doi.org/10.1186/s13068-015-0327-7 Text en © Lim et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Lim, Hyun Gyu
Lim, Jae Hyung
Jung, Gyoo Yeol
Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title_full Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title_fullStr Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title_full_unstemmed Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title_short Modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
title_sort modular design of metabolic network for robust production of n-butanol from galactose–glucose mixtures
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4559943/
https://www.ncbi.nlm.nih.gov/pubmed/26347006
http://dx.doi.org/10.1186/s13068-015-0327-7
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