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Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis
Leprosy is a chronic infectious disease that depends on the interplay of several factors. Single nucleotide polymorphisms (SNPs) in host immune related genes have been consistently suggested as participants in susceptibility towards disease. Interleukin-10 (IL-10) is a crucial immunomodulatory cytok...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4560376/ https://www.ncbi.nlm.nih.gov/pubmed/26340474 http://dx.doi.org/10.1371/journal.pone.0136282 |
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author | Alvarado-Arnez, Lucia Elena Amaral, Evaldo P. Sales-Marques, Carolinne M. B. Durães, Sandra C. Cardoso, Cynthia Nunes Sarno, Euzenir G. Pacheco, Antonio C. F. Lana, Francisco Ozório Moraes, Milton |
author_facet | Alvarado-Arnez, Lucia Elena Amaral, Evaldo P. Sales-Marques, Carolinne M. B. Durães, Sandra C. Cardoso, Cynthia Nunes Sarno, Euzenir G. Pacheco, Antonio C. F. Lana, Francisco Ozório Moraes, Milton |
author_sort | Alvarado-Arnez, Lucia Elena |
collection | PubMed |
description | Leprosy is a chronic infectious disease that depends on the interplay of several factors. Single nucleotide polymorphisms (SNPs) in host immune related genes have been consistently suggested as participants in susceptibility towards disease. Interleukin-10 (IL-10) is a crucial immunomodulatory cytokine in mycobacterial pathogenesis and especially the -819C>T SNP (rs1800871) has been tested in several case-control studies indicating association with leprosy risk, although a recent consensus estimate is still missing. In this study, we evaluated the association of the -819C>T SNP and leprosy in two new Brazilian family-based populations. Then, we performed meta-analysis for this polymorphism summarizing published studies including these Brazilian family-based groups. Finally, we also retrieved published studies for other distal and proximal IL10 polymorphisms: -3575 T>A (rs1800890), -2849 G>A (rs6703630), -2763 C>A (rs6693899), -1082 G>A (rs1800896) and -592 C>A (rs1800872). Results from meta-analysis supported a significant susceptibility association for the -819T allele, with pooled Odds Ratio of 1.22 (CI = 1.11–1.34) and P-value = 3x10(–5) confirming previous data. This result remained unaltered after inclusion of the Brazilian family-based groups (OR = 1.2, CI = 1.10–1.31, P-value = 2x10(–5)). Also, meta-analysis confirmed association of -592 A allele and leprosy outcome (OR = 1.24, CI = 1.03–1.50, P-value = 0.02). In support of this, linkage disequilibrium analysis in 1000 genomes AFR, EUR, ASN and AMR populations pointed to r(2) = 1.0 between the -592C>A and -819C>T SNPs. We found no evidence of association for the other IL10 polymorphisms analyzed for leprosy outcome. Our results reinforce the role of the -819C>T as a tag SNP (rs1800871) and its association with leprosy susceptibility. |
format | Online Article Text |
id | pubmed-4560376 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45603762015-09-10 Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis Alvarado-Arnez, Lucia Elena Amaral, Evaldo P. Sales-Marques, Carolinne M. B. Durães, Sandra C. Cardoso, Cynthia Nunes Sarno, Euzenir G. Pacheco, Antonio C. F. Lana, Francisco Ozório Moraes, Milton PLoS One Research Article Leprosy is a chronic infectious disease that depends on the interplay of several factors. Single nucleotide polymorphisms (SNPs) in host immune related genes have been consistently suggested as participants in susceptibility towards disease. Interleukin-10 (IL-10) is a crucial immunomodulatory cytokine in mycobacterial pathogenesis and especially the -819C>T SNP (rs1800871) has been tested in several case-control studies indicating association with leprosy risk, although a recent consensus estimate is still missing. In this study, we evaluated the association of the -819C>T SNP and leprosy in two new Brazilian family-based populations. Then, we performed meta-analysis for this polymorphism summarizing published studies including these Brazilian family-based groups. Finally, we also retrieved published studies for other distal and proximal IL10 polymorphisms: -3575 T>A (rs1800890), -2849 G>A (rs6703630), -2763 C>A (rs6693899), -1082 G>A (rs1800896) and -592 C>A (rs1800872). Results from meta-analysis supported a significant susceptibility association for the -819T allele, with pooled Odds Ratio of 1.22 (CI = 1.11–1.34) and P-value = 3x10(–5) confirming previous data. This result remained unaltered after inclusion of the Brazilian family-based groups (OR = 1.2, CI = 1.10–1.31, P-value = 2x10(–5)). Also, meta-analysis confirmed association of -592 A allele and leprosy outcome (OR = 1.24, CI = 1.03–1.50, P-value = 0.02). In support of this, linkage disequilibrium analysis in 1000 genomes AFR, EUR, ASN and AMR populations pointed to r(2) = 1.0 between the -592C>A and -819C>T SNPs. We found no evidence of association for the other IL10 polymorphisms analyzed for leprosy outcome. Our results reinforce the role of the -819C>T as a tag SNP (rs1800871) and its association with leprosy susceptibility. Public Library of Science 2015-09-04 /pmc/articles/PMC4560376/ /pubmed/26340474 http://dx.doi.org/10.1371/journal.pone.0136282 Text en © 2015 Alvarado-Arnez et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Alvarado-Arnez, Lucia Elena Amaral, Evaldo P. Sales-Marques, Carolinne M. B. Durães, Sandra C. Cardoso, Cynthia Nunes Sarno, Euzenir G. Pacheco, Antonio C. F. Lana, Francisco Ozório Moraes, Milton Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title | Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title_full | Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title_fullStr | Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title_full_unstemmed | Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title_short | Association of IL10 Polymorphisms and Leprosy: A Meta-Analysis |
title_sort | association of il10 polymorphisms and leprosy: a meta-analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4560376/ https://www.ncbi.nlm.nih.gov/pubmed/26340474 http://dx.doi.org/10.1371/journal.pone.0136282 |
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