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Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura

Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or...

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Autores principales: Gu, Shao-Hua, Zhou, Jing-Jiang, Gao, Shang, Wang, Da-Hai, Li, Xian-Chun, Guo, Yu-Yuan, Zhang, Yong-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561897/
https://www.ncbi.nlm.nih.gov/pubmed/26346731
http://dx.doi.org/10.1038/srep13800
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author Gu, Shao-Hua
Zhou, Jing-Jiang
Gao, Shang
Wang, Da-Hai
Li, Xian-Chun
Guo, Yu-Yuan
Zhang, Yong-Jun
author_facet Gu, Shao-Hua
Zhou, Jing-Jiang
Gao, Shang
Wang, Da-Hai
Li, Xian-Chun
Guo, Yu-Yuan
Zhang, Yong-Jun
author_sort Gu, Shao-Hua
collection PubMed
description Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or primarily expressed in the antennae of both sexes, suggesting their putative role in chemoreception. The RPKM value analysis revealed that seven OBPs (SlitPBP1-3, SlitGOBP1-2, SlitOBP3 and SlitOBP5) are highly abundant in male and female antennae. Most S. litura antennal unigenes had high homology with Lepidoptera insects, especially genes of the genus Spodoptera. Phylogenetic analysis of the Lepidoptera OBPs demonstrated that the OBP genes from the genus Spodoptera (S. litura, Spodoptera littoralis and Spodoptera exigua) had a relatively close evolutionary relationship. Some regular patterns and key conserved motifs of OBPs in genus Spodoptera are identified by MEME, and their putative roles in detecting odorants are discussed here. The motif-patterns between Lepidoptera OBPs and CSPs are also compared. The SlitOBPs identified here provide a starting point to facilitate functional studies of insect OBPs at the molecular level both in vivo and in vitro.
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spelling pubmed-45618972015-09-15 Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura Gu, Shao-Hua Zhou, Jing-Jiang Gao, Shang Wang, Da-Hai Li, Xian-Chun Guo, Yu-Yuan Zhang, Yong-Jun Sci Rep Article Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or primarily expressed in the antennae of both sexes, suggesting their putative role in chemoreception. The RPKM value analysis revealed that seven OBPs (SlitPBP1-3, SlitGOBP1-2, SlitOBP3 and SlitOBP5) are highly abundant in male and female antennae. Most S. litura antennal unigenes had high homology with Lepidoptera insects, especially genes of the genus Spodoptera. Phylogenetic analysis of the Lepidoptera OBPs demonstrated that the OBP genes from the genus Spodoptera (S. litura, Spodoptera littoralis and Spodoptera exigua) had a relatively close evolutionary relationship. Some regular patterns and key conserved motifs of OBPs in genus Spodoptera are identified by MEME, and their putative roles in detecting odorants are discussed here. The motif-patterns between Lepidoptera OBPs and CSPs are also compared. The SlitOBPs identified here provide a starting point to facilitate functional studies of insect OBPs at the molecular level both in vivo and in vitro. Nature Publishing Group 2015-09-08 /pmc/articles/PMC4561897/ /pubmed/26346731 http://dx.doi.org/10.1038/srep13800 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Gu, Shao-Hua
Zhou, Jing-Jiang
Gao, Shang
Wang, Da-Hai
Li, Xian-Chun
Guo, Yu-Yuan
Zhang, Yong-Jun
Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title_full Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title_fullStr Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title_full_unstemmed Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title_short Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
title_sort identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm spodoptera litura
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561897/
https://www.ncbi.nlm.nih.gov/pubmed/26346731
http://dx.doi.org/10.1038/srep13800
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