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Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura
Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561897/ https://www.ncbi.nlm.nih.gov/pubmed/26346731 http://dx.doi.org/10.1038/srep13800 |
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author | Gu, Shao-Hua Zhou, Jing-Jiang Gao, Shang Wang, Da-Hai Li, Xian-Chun Guo, Yu-Yuan Zhang, Yong-Jun |
author_facet | Gu, Shao-Hua Zhou, Jing-Jiang Gao, Shang Wang, Da-Hai Li, Xian-Chun Guo, Yu-Yuan Zhang, Yong-Jun |
author_sort | Gu, Shao-Hua |
collection | PubMed |
description | Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or primarily expressed in the antennae of both sexes, suggesting their putative role in chemoreception. The RPKM value analysis revealed that seven OBPs (SlitPBP1-3, SlitGOBP1-2, SlitOBP3 and SlitOBP5) are highly abundant in male and female antennae. Most S. litura antennal unigenes had high homology with Lepidoptera insects, especially genes of the genus Spodoptera. Phylogenetic analysis of the Lepidoptera OBPs demonstrated that the OBP genes from the genus Spodoptera (S. litura, Spodoptera littoralis and Spodoptera exigua) had a relatively close evolutionary relationship. Some regular patterns and key conserved motifs of OBPs in genus Spodoptera are identified by MEME, and their putative roles in detecting odorants are discussed here. The motif-patterns between Lepidoptera OBPs and CSPs are also compared. The SlitOBPs identified here provide a starting point to facilitate functional studies of insect OBPs at the molecular level both in vivo and in vitro. |
format | Online Article Text |
id | pubmed-4561897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-45618972015-09-15 Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura Gu, Shao-Hua Zhou, Jing-Jiang Gao, Shang Wang, Da-Hai Li, Xian-Chun Guo, Yu-Yuan Zhang, Yong-Jun Sci Rep Article Insect odorant binding proteins (OBPs) are thought to involve in insects’ olfaction perception. In the present study, we identified 38 OBP genes from the antennal transcriptomes of Spodoptera litura. Tissue expression profiles analysis revealed that 17 of the 38 SlitOBP transcripts were uniquely or primarily expressed in the antennae of both sexes, suggesting their putative role in chemoreception. The RPKM value analysis revealed that seven OBPs (SlitPBP1-3, SlitGOBP1-2, SlitOBP3 and SlitOBP5) are highly abundant in male and female antennae. Most S. litura antennal unigenes had high homology with Lepidoptera insects, especially genes of the genus Spodoptera. Phylogenetic analysis of the Lepidoptera OBPs demonstrated that the OBP genes from the genus Spodoptera (S. litura, Spodoptera littoralis and Spodoptera exigua) had a relatively close evolutionary relationship. Some regular patterns and key conserved motifs of OBPs in genus Spodoptera are identified by MEME, and their putative roles in detecting odorants are discussed here. The motif-patterns between Lepidoptera OBPs and CSPs are also compared. The SlitOBPs identified here provide a starting point to facilitate functional studies of insect OBPs at the molecular level both in vivo and in vitro. Nature Publishing Group 2015-09-08 /pmc/articles/PMC4561897/ /pubmed/26346731 http://dx.doi.org/10.1038/srep13800 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Gu, Shao-Hua Zhou, Jing-Jiang Gao, Shang Wang, Da-Hai Li, Xian-Chun Guo, Yu-Yuan Zhang, Yong-Jun Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title | Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title_full | Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title_fullStr | Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title_full_unstemmed | Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title_short | Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura |
title_sort | identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm spodoptera litura |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561897/ https://www.ncbi.nlm.nih.gov/pubmed/26346731 http://dx.doi.org/10.1038/srep13800 |
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