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Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli
L-tyrosine is a commercially important compound in the food, pharmaceutical, chemical, and cosmetic industries. Although several attempts have been made to improve L-tyrosine production, translation-level expression control and carbon flux rebalancing around phosphoenolpyruvate (PEP) node still rema...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561953/ https://www.ncbi.nlm.nih.gov/pubmed/26346938 http://dx.doi.org/10.1038/srep13853 |
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author | Cheol Kim, Seong Eun Min, Byung Gyu Hwang, Hyun Woo Seo, Sang Yeol Jung, Gyoo |
author_facet | Cheol Kim, Seong Eun Min, Byung Gyu Hwang, Hyun Woo Seo, Sang Yeol Jung, Gyoo |
author_sort | Cheol Kim, Seong |
collection | PubMed |
description | L-tyrosine is a commercially important compound in the food, pharmaceutical, chemical, and cosmetic industries. Although several attempts have been made to improve L-tyrosine production, translation-level expression control and carbon flux rebalancing around phosphoenolpyruvate (PEP) node still remain to be achieved for optimizing the pathway. Here, we demonstrate pathway optimization by altering gene expression levels for L-tyrosine production in Escherichia coli. To optimize the L-tyrosine biosynthetic pathway, a synthetic constitutive promoter and a synthetic 5′-untranslated region (5′-UTR) were introduced for each gene of interest to allow for control at both transcription and translation levels. Carbon flux rebalancing was achieved by controlling the expression level of PEP synthetase using UTR Designer. The L-tyrosine productivity of the engineered E. coli strain was increased through pathway optimization resulting in 3.0 g/L of L-tyrosine titer, 0.0354 g L-tyrosine/h/g DCW of productivity, and 0.102 g L-tyrosine/g glucose yield. Thus, this work demonstrates that pathway optimization by 5′-UTR redesign is an effective strategy for the development of efficient L-tyrosine-producing bacteria. |
format | Online Article Text |
id | pubmed-4561953 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-45619532015-09-15 Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli Cheol Kim, Seong Eun Min, Byung Gyu Hwang, Hyun Woo Seo, Sang Yeol Jung, Gyoo Sci Rep Article L-tyrosine is a commercially important compound in the food, pharmaceutical, chemical, and cosmetic industries. Although several attempts have been made to improve L-tyrosine production, translation-level expression control and carbon flux rebalancing around phosphoenolpyruvate (PEP) node still remain to be achieved for optimizing the pathway. Here, we demonstrate pathway optimization by altering gene expression levels for L-tyrosine production in Escherichia coli. To optimize the L-tyrosine biosynthetic pathway, a synthetic constitutive promoter and a synthetic 5′-untranslated region (5′-UTR) were introduced for each gene of interest to allow for control at both transcription and translation levels. Carbon flux rebalancing was achieved by controlling the expression level of PEP synthetase using UTR Designer. The L-tyrosine productivity of the engineered E. coli strain was increased through pathway optimization resulting in 3.0 g/L of L-tyrosine titer, 0.0354 g L-tyrosine/h/g DCW of productivity, and 0.102 g L-tyrosine/g glucose yield. Thus, this work demonstrates that pathway optimization by 5′-UTR redesign is an effective strategy for the development of efficient L-tyrosine-producing bacteria. Nature Publishing Group 2015-09-08 /pmc/articles/PMC4561953/ /pubmed/26346938 http://dx.doi.org/10.1038/srep13853 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Cheol Kim, Seong Eun Min, Byung Gyu Hwang, Hyun Woo Seo, Sang Yeol Jung, Gyoo Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title | Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title_full | Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title_fullStr | Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title_full_unstemmed | Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title_short | Pathway optimization by re-design of untranslated regions for L-tyrosine production in Escherichia coli |
title_sort | pathway optimization by re-design of untranslated regions for l-tyrosine production in escherichia coli |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561953/ https://www.ncbi.nlm.nih.gov/pubmed/26346938 http://dx.doi.org/10.1038/srep13853 |
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