Cargando…

cFinder: definition and quantification of multiple haplotypes in a mixed sample

BACKGROUND: Next-generation sequencing allows for determining the genetic composition of a mixed sample. For instance, when performing resistance testing for BCR-ABL1 it is necessary to identify clones and define compound mutations; together with an exact quantification this may complement diagnosis...

Descripción completa

Detalles Bibliográficos
Autores principales:	Niklas, Norbert, Hafenscher, Julia, Barna, Agnes, Wiesinger, Karin, Pröll, Johannes, Dreiseitl, Stephan, Preuner-Stix, Sandra, Valent, Peter, Lion, Thomas, Gabriel, Christian
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Technical Note
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4562109/ https://www.ncbi.nlm.nih.gov/pubmed/26346608 http://dx.doi.org/10.1186/s13104-015-1382-7

Ejemplares similares

RegCFinder: targeted discovery of genomic subregions with differential read density
por: Weiß, Elena, et al.
Publicado: (2023)

Approximation properties of haplotype tagging
por: Vinterbo, Staal A, et al.
Publicado: (2006)

BS-virus-finder: virus integration calling using bisulfite sequencing data
por: Gao, Shengjie, et al.
Publicado: (2017)

Accelerating Cancer Patient Recruitment Through a Mobile Application (Clinical Trial Finder)
por: Mudaranthakam, Dinesh Pal, et al.
Publicado: (2022)

Bore-Sight Calibration of Multiple Laser Range Finders for Kinematic 3D Laser Scanning Systems
por: Jung, Jaehoon, et al.
Publicado: (2015)

RNAm5Cfinder: A Web-server for Predicting RNA 5-methylcytosine (m5C) Sites Based on Random Forest
por: Li, Jianwei, et al.
Publicado: (2018)

Quantitative Analysis of Mutant Subclones in Chronic Myeloid Leukemia: Comparison of Different Methodological Approaches
por: Preuner, Sandra, et al.
Publicado: (2016)

SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations
por: Guiblet, Wilfried M, et al.
Publicado: (2015)

HaploMaker: An improved algorithm for rapid haplotype assembly of genomic sequences
por: Fruzangohar, Mario, et al.
Publicado: (2022)

SciFinder
por: Gabrielson, Stephen Walter
Publicado: (2018)

Quantification of nitrotyrosine in nitrated proteins
por: Yang, Hong, et al.
Publicado: (2010)

An improved 96 well plate format lipid quantification assay for standardisation of experiments with extracellular vesicles
por: Visnovitz, Tamás, et al.
Publicado: (2019)

Tentacle: distributed quantification of genes in metagenomes
por: Boulund, Fredrik, et al.
Publicado: (2015)

Application of direct PCR in rapid rDNA ITS haplotype determination of the hyperparasitic fungus Sphaeropsis visci (Botryosphaeriaceae)
por: Varga, Ildikó, et al.
Publicado: (2014)

BasePhasing: a highly efficient approach for preimplantation genetic haplotyping in clinical application of balanced translocation carriers
por: Zhang, Shuo, et al.
Publicado: (2019)

Haplotyping by linked-read sequencing (HLRS) of the genetic disease carriers for preimplantation genetic testing without a proband or relatives
por: Li, Qing, et al.
Publicado: (2020)

An Interdisciplinary Definition of Pornography: Results from a Global Delphi Panel
por: McKee, Alan, et al.
Publicado: (2019)

Strengths finder 2.0
por: Rath, Tom
Publicado: (2007)

Secondary Vertex Finder Algorithm
por: Heer, Sebastian
Publicado: (2017)

Muon ID and the Kink Finder
por: Vernon, I R, et al.
Publicado: (1998)

Information Retrieval: SciFinder
por: Ridley, Damon
Publicado: (2009)

A Micrometer Object-Finder
por: Farrants, R. J.
Publicado: (1857)

The COVID-19 Trial Finder
por: Sun, Yingcheng, et al.
Publicado: (2020)

Prognostic impact of immunohistopathologic features in definitive radiation therapy for nasopharyngeal cancer patients
por: Murakami, Naoya, et al.
Publicado: (2019)

Differences in the distribution of attention to trained procedure between finders and non-finders of the alternative better procedure
por: Ninomiya, Yuki, et al.
Publicado: (2022)

Quantification of global myocardial oxygenation in humans: initial experience
por: McCommis, Kyle S, et al.
Publicado: (2010)

Stereological and ultrastructural quantification of the afferent synaptome of individual neurons
por: Henny, Pablo, et al.
Publicado: (2013)

Clinical-Scale Production of CAR-T Cells for the Treatment of Melanoma Patients by mRNA Transfection of a CSPG4-Specific CAR under Full GMP Compliance
por: Wiesinger, Manuel, et al.
Publicado: (2019)

Guidelines for patient-specific jawline definition with titanium implants in esthetic, deformity, and malformation surgery
por: Mommaerts, Maurice Yves
Publicado: (2016)

Simultaneous Quantification of the Acetylome and Succinylome by ‘One‐Pot’ Affinity Enrichment
por: Basisty, Nathan, et al.
Publicado: (2018)

LTR_FINDER_parallel: parallelization of LTR_FINDER enabling rapid identification of long terminal repeat retrotransposons
por: Ou, Shujun, et al.
Publicado: (2019)

Novel Use of Biphasic Cuirass Ventilation During Definitive Radiation Therapy: A Technical Report
por: Clinkscales, William, et al.
Publicado: (2020)

Quantification of epicardial fat using 3D cine Dixon MRI
por: Henningsson, Markus, et al.
Publicado: (2020)

Quantification of histopathological findings using a novel image analysis platform
por: Horai, Yasushi, et al.
Publicado: (2019)

Optimized Protocol for Preservation of Human Platelet Samples for Fluorometric Polyphosphate Quantification
por: Kawase, Tomoyuki, et al.
Publicado: (2023)

Level 1 Track Finder at CMS
por: Hart, Andrew Evan
Publicado: (2019)

Level 1 Track Finder at CMS
por: Hart, Andrew
Publicado: (2019)

Matthew Hopkins; Witch Finder General
Publicado: (1977)

QFNDIP, a primary vertex finder
por: Brown, D
Publicado: (1992)

Simulated Performance of the CSC Track-Finder
por: Acosta, Darin, et al.
Publicado: (2001)

Cannot write session to /tmp/vufind_sessions/sess_6rs2ikpi5422nfp841h45cvrbi