Xenopus tropicalis Genome Re-Scaffolding and Re-Annotation Reach the Resolution Required for In Vivo ChIA-PET Analysis

Genome-wide functional analyses require high-resolution genome assembly and annotation. We applied ChIA-PET to analyze gene regulatory networks, including 3D chromosome interactions, underlying thyroid hormone (TH) signaling in the frog Xenopus tropicalis. As the available versions of Xenopus tropic...

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Detalles Bibliográficos
Autores principales: Buisine, Nicolas, Ruan, Xiaoan, Bilesimo, Patrice, Grimaldi, Alexis, Alfama, Gladys, Ariyaratne, Pramila, Mulawadi, Fabianus, Chen, Jieqi, Sung, Wing-Kin, Liu, Edison T., Demeneix, Barbara A., Ruan, Yijun, Sachs, Laurent M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4562602/
https://www.ncbi.nlm.nih.gov/pubmed/26348928
http://dx.doi.org/10.1371/journal.pone.0137526

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