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Diversity of laccase-coding genes in Fusarium oxysporum genomes
Multiple studies confirm laccase role in fungal pathogenicity and lignocellulose degradation. In spite of broad genomic research, laccases from plant wilt pathogen Fusarium oxysporum are still not characterized. The study aimed to identify F. oxysporum genes that may encode laccases sensu stricto an...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4564759/ https://www.ncbi.nlm.nih.gov/pubmed/26441870 http://dx.doi.org/10.3389/fmicb.2015.00933 |
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author | Kwiatos, Natalia Ryngajłło, Małgorzata Bielecki, Stanisław |
author_facet | Kwiatos, Natalia Ryngajłło, Małgorzata Bielecki, Stanisław |
author_sort | Kwiatos, Natalia |
collection | PubMed |
description | Multiple studies confirm laccase role in fungal pathogenicity and lignocellulose degradation. In spite of broad genomic research, laccases from plant wilt pathogen Fusarium oxysporum are still not characterized. The study aimed to identify F. oxysporum genes that may encode laccases sensu stricto and to characterize the proteins in silico in order to facilitate further research on their impact on the mentioned processes. Twelve sequenced F. oxysporum genomes available on Broad Institute of Harvard and MIT (2015) website were analyzed and three genes that may encode laccases sensu stricto were found. Their amino acid sequences possess all features essential for their catalytic activity, moreover, the homology models proved the characteristic 3D laccase structures. The study shades light on F. oxysporum as a new source of multicopper oxidases, enzymes with possible high redox potential and broad perspective in biotechnological applications. |
format | Online Article Text |
id | pubmed-4564759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-45647592015-10-05 Diversity of laccase-coding genes in Fusarium oxysporum genomes Kwiatos, Natalia Ryngajłło, Małgorzata Bielecki, Stanisław Front Microbiol Microbiology Multiple studies confirm laccase role in fungal pathogenicity and lignocellulose degradation. In spite of broad genomic research, laccases from plant wilt pathogen Fusarium oxysporum are still not characterized. The study aimed to identify F. oxysporum genes that may encode laccases sensu stricto and to characterize the proteins in silico in order to facilitate further research on their impact on the mentioned processes. Twelve sequenced F. oxysporum genomes available on Broad Institute of Harvard and MIT (2015) website were analyzed and three genes that may encode laccases sensu stricto were found. Their amino acid sequences possess all features essential for their catalytic activity, moreover, the homology models proved the characteristic 3D laccase structures. The study shades light on F. oxysporum as a new source of multicopper oxidases, enzymes with possible high redox potential and broad perspective in biotechnological applications. Frontiers Media S.A. 2015-09-10 /pmc/articles/PMC4564759/ /pubmed/26441870 http://dx.doi.org/10.3389/fmicb.2015.00933 Text en Copyright © 2015 Kwiatos, Ryngajłło and Bielecki. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Kwiatos, Natalia Ryngajłło, Małgorzata Bielecki, Stanisław Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title | Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title_full | Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title_fullStr | Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title_full_unstemmed | Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title_short | Diversity of laccase-coding genes in Fusarium oxysporum genomes |
title_sort | diversity of laccase-coding genes in fusarium oxysporum genomes |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4564759/ https://www.ncbi.nlm.nih.gov/pubmed/26441870 http://dx.doi.org/10.3389/fmicb.2015.00933 |
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