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PsyGeNET: a knowledge platform on psychiatric disorders and their genes
Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeN...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565028/ https://www.ncbi.nlm.nih.gov/pubmed/25964630 http://dx.doi.org/10.1093/bioinformatics/btv301 |
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author | Gutiérrez-Sacristán, Alba Grosdidier, Solène Valverde, Olga Torrens, Marta Bravo, Àlex Piñero, Janet Sanz, Ferran Furlong, Laura I. |
author_facet | Gutiérrez-Sacristán, Alba Grosdidier, Solène Valverde, Olga Torrens, Marta Bravo, Àlex Piñero, Janet Sanz, Ferran Furlong, Laura I. |
author_sort | Gutiérrez-Sacristán, Alba |
collection | PubMed |
description | Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeNET integrates information from DisGeNET and data extracted from the literature by text mining, which has been curated by domain experts. It currently contains 2642 associations between 1271 genes and 37 psychiatric disease concepts. In its first release, PsyGeNET is focused on three psychiatric disorders: major depression, alcohol and cocaine use disorders. PsyGeNET represents a comprehensive, open access resource for the analysis of the molecular mechanisms underpinning psychiatric disorders and their comorbidities. Availability and implementation: The PysGeNET platform is freely available at http://www.psygenet.org/. The PsyGeNET database is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). Contact: lfurlong@imim.es Supplementary information: Supplementary data are available at Bioinformatics online. |
format | Online Article Text |
id | pubmed-4565028 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-45650282015-09-18 PsyGeNET: a knowledge platform on psychiatric disorders and their genes Gutiérrez-Sacristán, Alba Grosdidier, Solène Valverde, Olga Torrens, Marta Bravo, Àlex Piñero, Janet Sanz, Ferran Furlong, Laura I. Bioinformatics Applications Notes Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeNET integrates information from DisGeNET and data extracted from the literature by text mining, which has been curated by domain experts. It currently contains 2642 associations between 1271 genes and 37 psychiatric disease concepts. In its first release, PsyGeNET is focused on three psychiatric disorders: major depression, alcohol and cocaine use disorders. PsyGeNET represents a comprehensive, open access resource for the analysis of the molecular mechanisms underpinning psychiatric disorders and their comorbidities. Availability and implementation: The PysGeNET platform is freely available at http://www.psygenet.org/. The PsyGeNET database is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). Contact: lfurlong@imim.es Supplementary information: Supplementary data are available at Bioinformatics online. Oxford University Press 2015-09-15 2015-05-11 /pmc/articles/PMC4565028/ /pubmed/25964630 http://dx.doi.org/10.1093/bioinformatics/btv301 Text en © The Author 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Applications Notes Gutiérrez-Sacristán, Alba Grosdidier, Solène Valverde, Olga Torrens, Marta Bravo, Àlex Piñero, Janet Sanz, Ferran Furlong, Laura I. PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title | PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title_full | PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title_fullStr | PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title_full_unstemmed | PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title_short | PsyGeNET: a knowledge platform on psychiatric disorders and their genes |
title_sort | psygenet: a knowledge platform on psychiatric disorders and their genes |
topic | Applications Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565028/ https://www.ncbi.nlm.nih.gov/pubmed/25964630 http://dx.doi.org/10.1093/bioinformatics/btv301 |
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