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PsyGeNET: a knowledge platform on psychiatric disorders and their genes

Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeN...

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Autores principales: Gutiérrez-Sacristán, Alba, Grosdidier, Solène, Valverde, Olga, Torrens, Marta, Bravo, Àlex, Piñero, Janet, Sanz, Ferran, Furlong, Laura I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565028/
https://www.ncbi.nlm.nih.gov/pubmed/25964630
http://dx.doi.org/10.1093/bioinformatics/btv301
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author Gutiérrez-Sacristán, Alba
Grosdidier, Solène
Valverde, Olga
Torrens, Marta
Bravo, Àlex
Piñero, Janet
Sanz, Ferran
Furlong, Laura I.
author_facet Gutiérrez-Sacristán, Alba
Grosdidier, Solène
Valverde, Olga
Torrens, Marta
Bravo, Àlex
Piñero, Janet
Sanz, Ferran
Furlong, Laura I.
author_sort Gutiérrez-Sacristán, Alba
collection PubMed
description Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeNET integrates information from DisGeNET and data extracted from the literature by text mining, which has been curated by domain experts. It currently contains 2642 associations between 1271 genes and 37 psychiatric disease concepts. In its first release, PsyGeNET is focused on three psychiatric disorders: major depression, alcohol and cocaine use disorders. PsyGeNET represents a comprehensive, open access resource for the analysis of the molecular mechanisms underpinning psychiatric disorders and their comorbidities. Availability and implementation: The PysGeNET platform is freely available at http://www.psygenet.org/. The PsyGeNET database is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). Contact: lfurlong@imim.es Supplementary information: Supplementary data are available at Bioinformatics online.
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spelling pubmed-45650282015-09-18 PsyGeNET: a knowledge platform on psychiatric disorders and their genes Gutiérrez-Sacristán, Alba Grosdidier, Solène Valverde, Olga Torrens, Marta Bravo, Àlex Piñero, Janet Sanz, Ferran Furlong, Laura I. Bioinformatics Applications Notes Summary: PsyGeNET (Psychiatric disorders and Genes association NETwork) is a knowledge platform for the exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of a database and a web interface supporting data search, visualization, filtering and sharing. PsyGeNET integrates information from DisGeNET and data extracted from the literature by text mining, which has been curated by domain experts. It currently contains 2642 associations between 1271 genes and 37 psychiatric disease concepts. In its first release, PsyGeNET is focused on three psychiatric disorders: major depression, alcohol and cocaine use disorders. PsyGeNET represents a comprehensive, open access resource for the analysis of the molecular mechanisms underpinning psychiatric disorders and their comorbidities. Availability and implementation: The PysGeNET platform is freely available at http://www.psygenet.org/. The PsyGeNET database is made available under the Open Database License (http://opendatacommons.org/licenses/odbl/1.0/). Contact: lfurlong@imim.es Supplementary information: Supplementary data are available at Bioinformatics online. Oxford University Press 2015-09-15 2015-05-11 /pmc/articles/PMC4565028/ /pubmed/25964630 http://dx.doi.org/10.1093/bioinformatics/btv301 Text en © The Author 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Applications Notes
Gutiérrez-Sacristán, Alba
Grosdidier, Solène
Valverde, Olga
Torrens, Marta
Bravo, Àlex
Piñero, Janet
Sanz, Ferran
Furlong, Laura I.
PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title_full PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title_fullStr PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title_full_unstemmed PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title_short PsyGeNET: a knowledge platform on psychiatric disorders and their genes
title_sort psygenet: a knowledge platform on psychiatric disorders and their genes
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565028/
https://www.ncbi.nlm.nih.gov/pubmed/25964630
http://dx.doi.org/10.1093/bioinformatics/btv301
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