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Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments

BACKGROUND: Treatments based on electroporation are a new and promising approach to treating tumors, especially non-resectable ones. The success of the treatment is, however, heavily dependent on coverage of the entire tumor volume with a sufficiently high electric field. Ensuring complete coverage...

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Autores principales: Marčan, Marija, Pavliha, Denis, Kos, Bor, Forjanič, Tadeja, Miklavčič, Damijan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565468/
https://www.ncbi.nlm.nih.gov/pubmed/26356007
http://dx.doi.org/10.1186/1475-925X-14-S3-S4
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author Marčan, Marija
Pavliha, Denis
Kos, Bor
Forjanič, Tadeja
Miklavčič, Damijan
author_facet Marčan, Marija
Pavliha, Denis
Kos, Bor
Forjanič, Tadeja
Miklavčič, Damijan
author_sort Marčan, Marija
collection PubMed
description BACKGROUND: Treatments based on electroporation are a new and promising approach to treating tumors, especially non-resectable ones. The success of the treatment is, however, heavily dependent on coverage of the entire tumor volume with a sufficiently high electric field. Ensuring complete coverage in the case of deep-seated tumors is not trivial and can in best way be ensured by patient-specific treatment planning. The basis of the treatment planning process consists of two complex tasks: medical image segmentation, and numerical modeling and optimization. METHODS: In addition to previously developed segmentation algorithms for several tissues (human liver, hepatic vessels, bone tissue and canine brain) and the algorithms for numerical modeling and optimization of treatment parameters, we developed a web-based tool to facilitate the translation of the algorithms and their application in the clinic. The developed web-based tool automatically builds a 3D model of the target tissue from the medical images uploaded by the user and then uses this 3D model to optimize treatment parameters. The tool enables the user to validate the results of the automatic segmentation and make corrections if necessary before delivering the final treatment plan. RESULTS: Evaluation of the tool was performed by five independent experts from four different institutions. During the evaluation, we gathered data concerning user experience and measured performance times for different components of the tool. Both user reports and performance times show significant reduction in treatment-planning complexity and time-consumption from 1-2 days to a few hours. CONCLUSIONS: The presented web-based tool is intended to facilitate the treatment planning process and reduce the time needed for it. It is crucial for facilitating expansion of electroporation-based treatments in the clinic and ensuring reliable treatment for the patients. The additional value of the tool is the possibility of easy upgrade and integration of modules with new functionalities as they are developed.
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spelling pubmed-45654682015-09-18 Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments Marčan, Marija Pavliha, Denis Kos, Bor Forjanič, Tadeja Miklavčič, Damijan Biomed Eng Online Research BACKGROUND: Treatments based on electroporation are a new and promising approach to treating tumors, especially non-resectable ones. The success of the treatment is, however, heavily dependent on coverage of the entire tumor volume with a sufficiently high electric field. Ensuring complete coverage in the case of deep-seated tumors is not trivial and can in best way be ensured by patient-specific treatment planning. The basis of the treatment planning process consists of two complex tasks: medical image segmentation, and numerical modeling and optimization. METHODS: In addition to previously developed segmentation algorithms for several tissues (human liver, hepatic vessels, bone tissue and canine brain) and the algorithms for numerical modeling and optimization of treatment parameters, we developed a web-based tool to facilitate the translation of the algorithms and their application in the clinic. The developed web-based tool automatically builds a 3D model of the target tissue from the medical images uploaded by the user and then uses this 3D model to optimize treatment parameters. The tool enables the user to validate the results of the automatic segmentation and make corrections if necessary before delivering the final treatment plan. RESULTS: Evaluation of the tool was performed by five independent experts from four different institutions. During the evaluation, we gathered data concerning user experience and measured performance times for different components of the tool. Both user reports and performance times show significant reduction in treatment-planning complexity and time-consumption from 1-2 days to a few hours. CONCLUSIONS: The presented web-based tool is intended to facilitate the treatment planning process and reduce the time needed for it. It is crucial for facilitating expansion of electroporation-based treatments in the clinic and ensuring reliable treatment for the patients. The additional value of the tool is the possibility of easy upgrade and integration of modules with new functionalities as they are developed. BioMed Central 2015-08-27 /pmc/articles/PMC4565468/ /pubmed/26356007 http://dx.doi.org/10.1186/1475-925X-14-S3-S4 Text en Copyright © 2015 Marčan et al.; http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Marčan, Marija
Pavliha, Denis
Kos, Bor
Forjanič, Tadeja
Miklavčič, Damijan
Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title_full Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title_fullStr Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title_full_unstemmed Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title_short Web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
title_sort web-based tool for visualization of electric field distribution in deep-seated body structures and planning of electroporation-based treatments
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4565468/
https://www.ncbi.nlm.nih.gov/pubmed/26356007
http://dx.doi.org/10.1186/1475-925X-14-S3-S4
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