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BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences
Virtualization is becoming increasingly important in bioscience, enabling assembly and provisioning of complete computer setups, including operating system, data, software, and services packaged as virtual machine images (VMIs). We present an open catalog of VMIs for the life sciences, where scienti...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Libertas Academica
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567039/ https://www.ncbi.nlm.nih.gov/pubmed/26401099 http://dx.doi.org/10.4137/BBI.S28636 |
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author | Dahlö, Martin Haziza, Frédéric Kallio, Aleksi Korpelainen, Eija Bongcam-Rudloff, Erik Spjuth, Ola |
author_facet | Dahlö, Martin Haziza, Frédéric Kallio, Aleksi Korpelainen, Eija Bongcam-Rudloff, Erik Spjuth, Ola |
author_sort | Dahlö, Martin |
collection | PubMed |
description | Virtualization is becoming increasingly important in bioscience, enabling assembly and provisioning of complete computer setups, including operating system, data, software, and services packaged as virtual machine images (VMIs). We present an open catalog of VMIs for the life sciences, where scientists can share information about images and optionally upload them to a server equipped with a large file system and fast Internet connection. Other scientists can then search for and download images that can be run on the local computer or in a cloud computing environment, providing easy access to bioinformatics environments. We also describe applications where VMIs aid life science research, including distributing tools and data, supporting reproducible analysis, and facilitating education. BioImg.org is freely available at: https://bioimg.org. |
format | Online Article Text |
id | pubmed-4567039 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-45670392015-09-23 BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences Dahlö, Martin Haziza, Frédéric Kallio, Aleksi Korpelainen, Eija Bongcam-Rudloff, Erik Spjuth, Ola Bioinform Biol Insights Technical Advance Virtualization is becoming increasingly important in bioscience, enabling assembly and provisioning of complete computer setups, including operating system, data, software, and services packaged as virtual machine images (VMIs). We present an open catalog of VMIs for the life sciences, where scientists can share information about images and optionally upload them to a server equipped with a large file system and fast Internet connection. Other scientists can then search for and download images that can be run on the local computer or in a cloud computing environment, providing easy access to bioinformatics environments. We also describe applications where VMIs aid life science research, including distributing tools and data, supporting reproducible analysis, and facilitating education. BioImg.org is freely available at: https://bioimg.org. Libertas Academica 2015-09-10 /pmc/articles/PMC4567039/ /pubmed/26401099 http://dx.doi.org/10.4137/BBI.S28636 Text en © 2015 the author(s), publisher and licensee Libertas Academica Ltd. This is an open-access article distributed under the terms of the Creative Commons CC-BY-NC 3.0 License. |
spellingShingle | Technical Advance Dahlö, Martin Haziza, Frédéric Kallio, Aleksi Korpelainen, Eija Bongcam-Rudloff, Erik Spjuth, Ola BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title | BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title_full | BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title_fullStr | BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title_full_unstemmed | BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title_short | BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences |
title_sort | bioimg.org: a catalog of virtual machine images for the life sciences |
topic | Technical Advance |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567039/ https://www.ncbi.nlm.nih.gov/pubmed/26401099 http://dx.doi.org/10.4137/BBI.S28636 |
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