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Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China

A novel avian influenza A H7N9-subtype virus emerged in China in 2013 and threatened global public health. Commercial kits that specifically detect avian influenza A (H7N9) virus RNA are urgently required to prepare for the emergence and potential pandemic of this novel influenza virus. The safety a...

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Autores principales: Shi, Dawei, Shen, Shu, Fan, Xingliang, Chen, Suhong, Wang, Dayan, Li, Changgui, Wu, Xing, Li, Lili, Bai, Dongting, Zhang, Chuntao, Wang, Junzhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567293/
https://www.ncbi.nlm.nih.gov/pubmed/26361351
http://dx.doi.org/10.1371/journal.pone.0137862
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author Shi, Dawei
Shen, Shu
Fan, Xingliang
Chen, Suhong
Wang, Dayan
Li, Changgui
Wu, Xing
Li, Lili
Bai, Dongting
Zhang, Chuntao
Wang, Junzhi
author_facet Shi, Dawei
Shen, Shu
Fan, Xingliang
Chen, Suhong
Wang, Dayan
Li, Changgui
Wu, Xing
Li, Lili
Bai, Dongting
Zhang, Chuntao
Wang, Junzhi
author_sort Shi, Dawei
collection PubMed
description A novel avian influenza A H7N9-subtype virus emerged in China in 2013 and threatened global public health. Commercial kits that specifically detect avian influenza A (H7N9) virus RNA are urgently required to prepare for the emergence and potential pandemic of this novel influenza virus. The safety and effectiveness of three commercial molecular diagnostic assays were evaluated using a quality-control panel and clinical specimens collected from over 90 patients with confirmed avian influenza A (H7N9) virus infections. The analytical performance evaluation showed that diverse influenza H7N9 viruses can be detected with high within- and between-lot reproducibility and without cross-reactivity to other influenza viruses (H1N1 pdm09, seasonal H1N1, H3N2, H5N1 and influenza B). The detection limit of all the commercial assays was 2.83 Log(10) copies/μl [0.7 Log(10)TCID(50)/mL of avian influenza A (H7N9) virus strain A/Zhejiang/DTID-ZJU01/2013], which is comparable to the method recommended by the World Health Organization (WHO). In addition, using a WHO-Chinese National Influenza Center (CNIC) method as a reference for clinical evaluation, positive agreement of more than 98% was determined for all of the commercial kits, while negative agreement of more than 99% was observed. In conclusion, our findings provide comprehensive evidence for the high performance of three commercial diagnostic assays and suggest the application of these assays as rapid and effective diagnostic tools for avian influenza A (H7N9) virus in the routine clinical practice of medical laboratories.
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spelling pubmed-45672932015-09-18 Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China Shi, Dawei Shen, Shu Fan, Xingliang Chen, Suhong Wang, Dayan Li, Changgui Wu, Xing Li, Lili Bai, Dongting Zhang, Chuntao Wang, Junzhi PLoS One Research Article A novel avian influenza A H7N9-subtype virus emerged in China in 2013 and threatened global public health. Commercial kits that specifically detect avian influenza A (H7N9) virus RNA are urgently required to prepare for the emergence and potential pandemic of this novel influenza virus. The safety and effectiveness of three commercial molecular diagnostic assays were evaluated using a quality-control panel and clinical specimens collected from over 90 patients with confirmed avian influenza A (H7N9) virus infections. The analytical performance evaluation showed that diverse influenza H7N9 viruses can be detected with high within- and between-lot reproducibility and without cross-reactivity to other influenza viruses (H1N1 pdm09, seasonal H1N1, H3N2, H5N1 and influenza B). The detection limit of all the commercial assays was 2.83 Log(10) copies/μl [0.7 Log(10)TCID(50)/mL of avian influenza A (H7N9) virus strain A/Zhejiang/DTID-ZJU01/2013], which is comparable to the method recommended by the World Health Organization (WHO). In addition, using a WHO-Chinese National Influenza Center (CNIC) method as a reference for clinical evaluation, positive agreement of more than 98% was determined for all of the commercial kits, while negative agreement of more than 99% was observed. In conclusion, our findings provide comprehensive evidence for the high performance of three commercial diagnostic assays and suggest the application of these assays as rapid and effective diagnostic tools for avian influenza A (H7N9) virus in the routine clinical practice of medical laboratories. Public Library of Science 2015-09-11 /pmc/articles/PMC4567293/ /pubmed/26361351 http://dx.doi.org/10.1371/journal.pone.0137862 Text en © 2015 Shi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Shi, Dawei
Shen, Shu
Fan, Xingliang
Chen, Suhong
Wang, Dayan
Li, Changgui
Wu, Xing
Li, Lili
Bai, Dongting
Zhang, Chuntao
Wang, Junzhi
Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title_full Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title_fullStr Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title_full_unstemmed Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title_short Evaluation of Commercial Diagnostic Assays for the Specific Detection of Avian Influenza A (H7N9) Virus RNA Using a Quality-Control Panel and Clinical Specimens in China
title_sort evaluation of commercial diagnostic assays for the specific detection of avian influenza a (h7n9) virus rna using a quality-control panel and clinical specimens in china
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567293/
https://www.ncbi.nlm.nih.gov/pubmed/26361351
http://dx.doi.org/10.1371/journal.pone.0137862
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