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A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees
INTRODUCTION: Multiple early warning scores (EWS) have been developed and implemented to reduce cardiac arrests on hospital wards. Case–control observational studies that generate an area under the receiver operator curve (AUROC) are the usual validation method, but investigators have also generated...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567680/ https://www.ncbi.nlm.nih.gov/pubmed/26353873 http://dx.doi.org/10.1136/bmjopen-2015-008699 |
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author | Xu, Michael Tam, Benjamin Thabane, Lehana Fox-Robichaud, Alison |
author_facet | Xu, Michael Tam, Benjamin Thabane, Lehana Fox-Robichaud, Alison |
author_sort | Xu, Michael |
collection | PubMed |
description | INTRODUCTION: Multiple early warning scores (EWS) have been developed and implemented to reduce cardiac arrests on hospital wards. Case–control observational studies that generate an area under the receiver operator curve (AUROC) are the usual validation method, but investigators have also generated EWS with algorithms with no prior clinical knowledge. We present a protocol for the validation and comparison of our local Hamilton Early Warning Score (HEWS) with that generated using decision tree (DT) methods. METHODS AND ANALYSIS: A database of electronically recorded vital signs from 4 medical and 4 surgical wards will be used to generate DT EWS (DT-HEWS). A third EWS will be generated using ensemble-based methods. Missing data will be multiple imputed. For a relative risk reduction of 50% in our composite outcome (cardiac or respiratory arrest, unanticipated intensive care unit (ICU) admission or hospital death) with a power of 80%, we calculated a sample size of 17 151 patient days based on our cardiac arrest rates in 2012. The performance of the National EWS, DT-HEWS and the ensemble EWS will be compared using AUROC. ETHICS AND DISSEMINATION: Ethics approval was received from the Hamilton Integrated Research Ethics Board (#13-724-C). The vital signs and associated outcomes are stored in a database on our secure hospital server. Preliminary dissemination of this protocol was presented in abstract form at an international critical care meeting. Final results of this analysis will be used to improve on the existing HEWS and will be shared through publication and presentation at critical care meetings. |
format | Online Article Text |
id | pubmed-4567680 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-45676802015-09-17 A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees Xu, Michael Tam, Benjamin Thabane, Lehana Fox-Robichaud, Alison BMJ Open Health Informatics INTRODUCTION: Multiple early warning scores (EWS) have been developed and implemented to reduce cardiac arrests on hospital wards. Case–control observational studies that generate an area under the receiver operator curve (AUROC) are the usual validation method, but investigators have also generated EWS with algorithms with no prior clinical knowledge. We present a protocol for the validation and comparison of our local Hamilton Early Warning Score (HEWS) with that generated using decision tree (DT) methods. METHODS AND ANALYSIS: A database of electronically recorded vital signs from 4 medical and 4 surgical wards will be used to generate DT EWS (DT-HEWS). A third EWS will be generated using ensemble-based methods. Missing data will be multiple imputed. For a relative risk reduction of 50% in our composite outcome (cardiac or respiratory arrest, unanticipated intensive care unit (ICU) admission or hospital death) with a power of 80%, we calculated a sample size of 17 151 patient days based on our cardiac arrest rates in 2012. The performance of the National EWS, DT-HEWS and the ensemble EWS will be compared using AUROC. ETHICS AND DISSEMINATION: Ethics approval was received from the Hamilton Integrated Research Ethics Board (#13-724-C). The vital signs and associated outcomes are stored in a database on our secure hospital server. Preliminary dissemination of this protocol was presented in abstract form at an international critical care meeting. Final results of this analysis will be used to improve on the existing HEWS and will be shared through publication and presentation at critical care meetings. BMJ Publishing Group 2015-09-09 /pmc/articles/PMC4567680/ /pubmed/26353873 http://dx.doi.org/10.1136/bmjopen-2015-008699 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ |
spellingShingle | Health Informatics Xu, Michael Tam, Benjamin Thabane, Lehana Fox-Robichaud, Alison A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title | A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title_full | A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title_fullStr | A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title_full_unstemmed | A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title_short | A protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
title_sort | protocol for developing early warning score models from vital signs data in hospitals using ensembles of decision trees |
topic | Health Informatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567680/ https://www.ncbi.nlm.nih.gov/pubmed/26353873 http://dx.doi.org/10.1136/bmjopen-2015-008699 |
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