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Prediction of colorectal cancer diagnosis based on circulating plasma proteins

Non-invasive detection of colorectal cancer with blood-based markers is a critical clinical need. Here we describe a phased mass spectrometry-based approach for the discovery, screening, and validation of circulating protein biomarkers with diagnostic value. Initially, we profiled human primary tumo...

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Autores principales: Surinova, Silvia, Choi, Meena, Tao, Sha, Schüffler, Peter J, Chang, Ching-Yun, Clough, Timothy, Vysloužil, Kamil, Khoylou, Marta, Srovnal, Josef, Liu, Yansheng, Matondo, Mariette, Hüttenhain, Ruth, Weisser, Hendrik, Buhmann, Joachim M, Hajdúch, Marián, Brenner, Hermann, Vitek, Olga, Aebersold, Ruedi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4568950/
https://www.ncbi.nlm.nih.gov/pubmed/26253081
http://dx.doi.org/10.15252/emmm.201404873
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author Surinova, Silvia
Choi, Meena
Tao, Sha
Schüffler, Peter J
Chang, Ching-Yun
Clough, Timothy
Vysloužil, Kamil
Khoylou, Marta
Srovnal, Josef
Liu, Yansheng
Matondo, Mariette
Hüttenhain, Ruth
Weisser, Hendrik
Buhmann, Joachim M
Hajdúch, Marián
Brenner, Hermann
Vitek, Olga
Aebersold, Ruedi
author_facet Surinova, Silvia
Choi, Meena
Tao, Sha
Schüffler, Peter J
Chang, Ching-Yun
Clough, Timothy
Vysloužil, Kamil
Khoylou, Marta
Srovnal, Josef
Liu, Yansheng
Matondo, Mariette
Hüttenhain, Ruth
Weisser, Hendrik
Buhmann, Joachim M
Hajdúch, Marián
Brenner, Hermann
Vitek, Olga
Aebersold, Ruedi
author_sort Surinova, Silvia
collection PubMed
description Non-invasive detection of colorectal cancer with blood-based markers is a critical clinical need. Here we describe a phased mass spectrometry-based approach for the discovery, screening, and validation of circulating protein biomarkers with diagnostic value. Initially, we profiled human primary tumor tissue epithelia and characterized about 300 secreted and cell surface candidate glycoproteins. These candidates were then screened in patient systemic circulation to identify detectable candidates in blood plasma. An 88-plex targeting method was established to systematically monitor these proteins in two large and independent cohorts of plasma samples, which generated quantitative clinical datasets at an unprecedented scale. The data were deployed to develop and evaluate a five-protein biomarker signature for colorectal cancer detection.
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spelling pubmed-45689502015-09-17 Prediction of colorectal cancer diagnosis based on circulating plasma proteins Surinova, Silvia Choi, Meena Tao, Sha Schüffler, Peter J Chang, Ching-Yun Clough, Timothy Vysloužil, Kamil Khoylou, Marta Srovnal, Josef Liu, Yansheng Matondo, Mariette Hüttenhain, Ruth Weisser, Hendrik Buhmann, Joachim M Hajdúch, Marián Brenner, Hermann Vitek, Olga Aebersold, Ruedi EMBO Mol Med Research Articles Non-invasive detection of colorectal cancer with blood-based markers is a critical clinical need. Here we describe a phased mass spectrometry-based approach for the discovery, screening, and validation of circulating protein biomarkers with diagnostic value. Initially, we profiled human primary tumor tissue epithelia and characterized about 300 secreted and cell surface candidate glycoproteins. These candidates were then screened in patient systemic circulation to identify detectable candidates in blood plasma. An 88-plex targeting method was established to systematically monitor these proteins in two large and independent cohorts of plasma samples, which generated quantitative clinical datasets at an unprecedented scale. The data were deployed to develop and evaluate a five-protein biomarker signature for colorectal cancer detection. John Wiley & Sons, Ltd 2015-09 2015-08-07 /pmc/articles/PMC4568950/ /pubmed/26253081 http://dx.doi.org/10.15252/emmm.201404873 Text en © 2015 The Authors. Published under the terms of the CC BY 4.0 license http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution 4.0 License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Surinova, Silvia
Choi, Meena
Tao, Sha
Schüffler, Peter J
Chang, Ching-Yun
Clough, Timothy
Vysloužil, Kamil
Khoylou, Marta
Srovnal, Josef
Liu, Yansheng
Matondo, Mariette
Hüttenhain, Ruth
Weisser, Hendrik
Buhmann, Joachim M
Hajdúch, Marián
Brenner, Hermann
Vitek, Olga
Aebersold, Ruedi
Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title_full Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title_fullStr Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title_full_unstemmed Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title_short Prediction of colorectal cancer diagnosis based on circulating plasma proteins
title_sort prediction of colorectal cancer diagnosis based on circulating plasma proteins
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4568950/
https://www.ncbi.nlm.nih.gov/pubmed/26253081
http://dx.doi.org/10.15252/emmm.201404873
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