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Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis
BACKGROUND: Magnetic Resonance Spectroscopy (MRS) can measure in vivo brain tissue metabolism that exhibits unique biochemical characteristics in brain tumors. For clinical application, an efficient and versatile quantification method of MRS would be an important tool for medical research, particula...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4569259/ https://www.ncbi.nlm.nih.gov/pubmed/26367871 http://dx.doi.org/10.1371/journal.pone.0137850 |
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author | Dou, Weibei Zhang, Mingyu Zhang, Xiaojie Li, Yuan Chen, Hongyan Li, Shaowu Lu, Min Dai, Jianping Constans, Jean-Marc |
author_facet | Dou, Weibei Zhang, Mingyu Zhang, Xiaojie Li, Yuan Chen, Hongyan Li, Shaowu Lu, Min Dai, Jianping Constans, Jean-Marc |
author_sort | Dou, Weibei |
collection | PubMed |
description | BACKGROUND: Magnetic Resonance Spectroscopy (MRS) can measure in vivo brain tissue metabolism that exhibits unique biochemical characteristics in brain tumors. For clinical application, an efficient and versatile quantification method of MRS would be an important tool for medical research, particularly for exploring the scientific problem of tumor monitoring. The objective of our study is to propose an automated MRS quantitative approach and assess the feasibility of this approach for glioma grading, prognosis and boundary detection. METHODS: An automated quantitative approach based on a convex envelope (AQoCE) is proposed in this paper, including preprocessing, convex-envelope based baseline fitting, bias correction, sectional baseline removal, and peak detection, in a total of 5 steps. Some metabolic ratios acquired by this quantification are selected for statistical analysis. An independent sample t-test and the Kruskal-Wallis test are used for distinguishing low-grade gliomas (LGG) and high-grade gliomas (HGG) and for detecting the tumor, peritumoral and contralateral areas, respectively. Seventy-eight cases of pre-operative brain gliomas with pathological reports are included in this study. RESULTS: Cho/NAA, Cho/Cr and Lip-Lac/Cr (LL/Cr) calculated by AQoCE in the tumor area differ significantly between LGG and HGG, with p≤0.005. Using logistic regression combining Cho/NAA, Cho/Cr and LL/Cr to generate a ROC curve, AQoCE achieves a sensitivity of 92.9%, a specificity of 72.2%, and an area under ROC curve (AUC) of 0.860. Moreover, both Cho/NAA and Cho/Cr in the AQoCE approach show a significant difference (p≤0.019) between tumoral, peritumoral, and contralateral areas. The comparison between the results of AQoCE and Siemens MRS processing software are also discussed in this paper. CONCLUSIONS: The AQoCE approach is an automated method of residual water removal and metabolite quantification. It can be applied to multi-voxel (1)H-MRS for evaluating brain glioma grading and demonstrating characteristics of brain glioma metabolism. It can also detect infiltration in the peritumoral area. Under the limited clinical data used, AQoCE is significantly more versatile and efficient compared to the reference approach of Siemens. |
format | Online Article Text |
id | pubmed-4569259 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45692592015-09-18 Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis Dou, Weibei Zhang, Mingyu Zhang, Xiaojie Li, Yuan Chen, Hongyan Li, Shaowu Lu, Min Dai, Jianping Constans, Jean-Marc PLoS One Research Article BACKGROUND: Magnetic Resonance Spectroscopy (MRS) can measure in vivo brain tissue metabolism that exhibits unique biochemical characteristics in brain tumors. For clinical application, an efficient and versatile quantification method of MRS would be an important tool for medical research, particularly for exploring the scientific problem of tumor monitoring. The objective of our study is to propose an automated MRS quantitative approach and assess the feasibility of this approach for glioma grading, prognosis and boundary detection. METHODS: An automated quantitative approach based on a convex envelope (AQoCE) is proposed in this paper, including preprocessing, convex-envelope based baseline fitting, bias correction, sectional baseline removal, and peak detection, in a total of 5 steps. Some metabolic ratios acquired by this quantification are selected for statistical analysis. An independent sample t-test and the Kruskal-Wallis test are used for distinguishing low-grade gliomas (LGG) and high-grade gliomas (HGG) and for detecting the tumor, peritumoral and contralateral areas, respectively. Seventy-eight cases of pre-operative brain gliomas with pathological reports are included in this study. RESULTS: Cho/NAA, Cho/Cr and Lip-Lac/Cr (LL/Cr) calculated by AQoCE in the tumor area differ significantly between LGG and HGG, with p≤0.005. Using logistic regression combining Cho/NAA, Cho/Cr and LL/Cr to generate a ROC curve, AQoCE achieves a sensitivity of 92.9%, a specificity of 72.2%, and an area under ROC curve (AUC) of 0.860. Moreover, both Cho/NAA and Cho/Cr in the AQoCE approach show a significant difference (p≤0.019) between tumoral, peritumoral, and contralateral areas. The comparison between the results of AQoCE and Siemens MRS processing software are also discussed in this paper. CONCLUSIONS: The AQoCE approach is an automated method of residual water removal and metabolite quantification. It can be applied to multi-voxel (1)H-MRS for evaluating brain glioma grading and demonstrating characteristics of brain glioma metabolism. It can also detect infiltration in the peritumoral area. Under the limited clinical data used, AQoCE is significantly more versatile and efficient compared to the reference approach of Siemens. Public Library of Science 2015-09-14 /pmc/articles/PMC4569259/ /pubmed/26367871 http://dx.doi.org/10.1371/journal.pone.0137850 Text en © 2015 Dou et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Dou, Weibei Zhang, Mingyu Zhang, Xiaojie Li, Yuan Chen, Hongyan Li, Shaowu Lu, Min Dai, Jianping Constans, Jean-Marc Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title | Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title_full | Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title_fullStr | Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title_full_unstemmed | Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title_short | Convex-Envelope Based Automated Quantitative Approach to Multi-Voxel (1)H-MRS Applied to Brain Tumor Analysis |
title_sort | convex-envelope based automated quantitative approach to multi-voxel (1)h-mrs applied to brain tumor analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4569259/ https://www.ncbi.nlm.nih.gov/pubmed/26367871 http://dx.doi.org/10.1371/journal.pone.0137850 |
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