Cargando…

A metabolomics-based strategy for identification of gene targets for phenotype improvement and its application to 1-butanol tolerance in Saccharomyces cerevisiae

BACKGROUND: Traditional approaches to phenotype improvement include rational selection of genes for modification, and probability-driven processes such as laboratory evolution or random mutagenesis. A promising middle-ground approach is semi-rational engineering, where genetic modification targets a...

Descripción completa

Detalles Bibliográficos
Autores principales:	Teoh, Shao Thing, Putri, Sastia, Mukai, Yukio, Bamba, Takeshi, Fukusaki, Eiichiro
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4570087/ https://www.ncbi.nlm.nih.gov/pubmed/26379776 http://dx.doi.org/10.1186/s13068-015-0330-z

Ejemplares similares

Metabolomics Analysis Reveals Global Metabolic Changes in the Evolved E. coli Strain with Improved Growth and 1-Butanol Production in Minimal Medium
por: Laviña, Walter A., et al.
Publicado: (2020)

Quantitative target analysis and kinetic profiling of acyl-CoAs reveal the rate-limiting step in cyanobacterial 1-butanol production
por: Noguchi, Shingo, et al.
Publicado: (2016)

Metabolomic Analysis of Response to Nitrogen-Limiting Conditions in Yarrowia spp.
por: Dissook, Sivamoke, et al.
Publicado: (2020)

Iterative cycle of widely targeted metabolic profiling for the improvement of 1-butanol titer and productivity in Synechococcus elongatus
por: Fathima, Artnice Mega, et al.
Publicado: (2018)

Effects of Soaking Tempe in Vinegar on Metabolome and Sensory Profiles
por: Dahlan, Hadi Akbar, et al.
Publicado: (2022)

Metabolomics-driven strain improvement: A mini review
por: Iman, Marvin Nathanael, et al.
Publicado: (2022)

Physiological adaptations of Saccharomyces cerevisiae evolved for improved butanol tolerance
por: Ghiaci, Payam, et al.
Publicado: (2013)

Metabolomics-Based Study of the Effect of Raw Materials to the End Product of Tempe—An Indonesian Fermented Soybean
por: Kadar, Adinda Darwati, et al.
Publicado: (2020)

Metabolic Profiling of Retrograde Pathway Transcription Factors Rtg1 and Rtg3 Knockout Yeast
por: Hashim, Zanariah, et al.
Publicado: (2014)

Novel Strategy for Non-Targeted Isotope-Assisted Metabolomics by Means of Metabolic Turnover and Multivariate Analysis
por: Nakayama, Yasumune, et al.
Publicado: (2014)

Identification of potential quality markers in Indonesia’s Arabica specialty coffee using GC/MS-based metabolomics approach
por: Amalia, Fitri, et al.
Publicado: (2023)

Metabolic engineering of Saccharomyces cerevisiae for the production of n-butanol
por: Steen, Eric J, et al.
Publicado: (2008)

Metabolome Analysis of Drosophila melanogaster during Embryogenesis
por: An, Phan Nguyen Thuy, et al.
Publicado: (2014)

Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation
por: González-Ramos, Daniel, et al.
Publicado: (2013)

A novel pathway to produce butanol and isobutanol in Saccharomyces cerevisiae
por: Branduardi, Paola, et al.
Publicado: (2013)

Identification of Key Metabolites in Poly-γ-Glutamic Acid Production by Tuning γ-PGA Synthetase Expression
por: Halmschlag, Birthe, et al.
Publicado: (2020)

Online monitoring of the respiratory quotient reveals metabolic phases during microaerobic 2,3‐butanediol production with Bacillus licheniformis
por: Heyman, Benedikt, et al.
Publicado: (2019)

GC-MS Based Metabolite Profiling to Monitor Ripening-Specific Metabolites in Pineapple (Ananas comosus)
por: Ikram, Muhammad Maulana Malikul, et al.
Publicado: (2020)

MALDI Mass Spectrometry Imaging Reveals the Existence of an N-Acyl-homoserine Lactone Quorum Sensing System in Pseudomonas putida Biofilms
por: Pitchapa, Rattanaburi, et al.
Publicado: (2022)

Stable isotope and chemical inhibition analyses suggested the existence of a non-mevalonate-like pathway in the yeast Yarrowia lipolytica
por: Dissook, Sivamoke, et al.
Publicado: (2021)

Metabolomics-Driven Identification of the Rate-Limiting Steps in 1-Propanol Production
por: Ohtake, Toshiyuki, et al.
Publicado: (2022)

Metabolic engineering of a synergistic pathway for n-butanol production in Saccharomyces cerevisiae
por: Shi, Shuobo, et al.
Publicado: (2016)

GC/MS based metabolomics: development of a data mining system for metabolite identification by using soft independent modeling of class analogy (SIMCA)
por: Tsugawa, Hiroshi, et al.
Publicado: (2011)

Multi-Omics Analysis of the Effect of cAMP on Actinorhodin Production in Streptomyces coelicolor
por: Nitta, Katsuaki, et al.
Publicado: (2020)

Component Profiling of Soy-Sauce-Like Seasoning Produced from Different Raw Materials
por: Yamana, Tomoyuki, et al.
Publicado: (2020)

Xylose utilization stimulates mitochondrial production of isobutanol and 2-methyl-1-butanol in Saccharomyces cerevisiae
por: Zhang, Yanfei, et al.
Publicado: (2019)

Comparison of Isomerase and Weimberg Pathway for γ-PGA Production From Xylose by Engineered Bacillus subtilis
por: Halmschlag, Birthe, et al.
Publicado: (2020)

Characterization of Cold-Tolerant Saccharomyces cerevisiae Cheongdo Using Phenotype Microarray
por: Jung, Kyung-Mi, et al.
Publicado: (2021)

n-Butanol production in Saccharomyces cerevisiae is limited by the availability of coenzyme A and cytosolic acetyl-CoA
por: Schadeweg, Virginia, et al.
Publicado: (2016)

Dynamic Changes in the Bacterial Community and Metabolic Profile during Fermentation of Low-Salt Shrimp Paste (Terasi)
por: Helmi, Henny, et al.
Publicado: (2022)

Metabolite Changes in Indonesian Tempe Production from Raw Soybeans to Over-Fermented Tempe
por: Prativi, Mahensa Billqys Nurhayati, et al.
Publicado: (2023)

Aneuploidy and Ethanol Tolerance in Saccharomyces cerevisiae
por: Morard, Miguel, et al.
Publicado: (2019)

Metabolomic analysis of fibrotic mice combined with public RNA‐Seq human lung data reveal potential diagnostic biomarker candidates for lung fibrosis
por: Nojima, Yosui, et al.
Publicado: (2020)

Ole1, fatty acid desaturase, is required for Atg9 delivery and isolation membrane expansion during autophagy in Saccharomyces cerevisiae
por: Ogasawara, Yuta, et al.
Publicado: (2016)

Integrative Analysis of the Ethanol Tolerance of Saccharomyces cerevisiae
por: Wolf, Ivan Rodrigo, et al.
Publicado: (2023)

Proline metabolism regulates replicative lifespan in the yeast Saccharomyces cerevisiae
por: Mukai, Yukio, et al.
Publicado: (2019)

Molar-Based Targeted Metabolic Profiling of Cyanobacterial Strains with Potential for Biological Production
por: Dempo, Yudai, et al.
Publicado: (2014)

MRM-DIFF: data processing strategy for differential analysis in large scale MRM-based lipidomics studies
por: Tsugawa, Hiroshi, et al.
Publicado: (2015)

Dataset of Cavendish banana transcriptome in response to chitosan coating application
por: Dwivany, Fenny Martha, et al.
Publicado: (2020)

Integrated analysis of metabolic phenotypes in Saccharomyces cerevisiae
por: Duarte, Natalie C, et al.
Publicado: (2004)

Cannot write session to /tmp/vufind_sessions/sess_mmu5e6ia22i6p6sq24t1pjls9t