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Database of host-pathogen and related species interactions, and their global distribution

Interactions between species, particularly where one is likely to be a pathogen of the other, as well as the geographical distribution of species, have been systematically extracted from various web-based, free-access sources, and assembled with the accompanying evidence into a single database. The...

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Autores principales: Wardeh, Maya, Risley, Claire, McIntyre, Marie Kirsty, Setzkorn, Christian, Baylis, Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4570150/
https://www.ncbi.nlm.nih.gov/pubmed/26401317
http://dx.doi.org/10.1038/sdata.2015.49
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author Wardeh, Maya
Risley, Claire
McIntyre, Marie Kirsty
Setzkorn, Christian
Baylis, Matthew
author_facet Wardeh, Maya
Risley, Claire
McIntyre, Marie Kirsty
Setzkorn, Christian
Baylis, Matthew
author_sort Wardeh, Maya
collection PubMed
description Interactions between species, particularly where one is likely to be a pathogen of the other, as well as the geographical distribution of species, have been systematically extracted from various web-based, free-access sources, and assembled with the accompanying evidence into a single database. The database attempts to answer questions such as what are all the pathogens of a host, and what are all the hosts of a pathogen, what are all the countries where a pathogen was found, and what are all the pathogens found in a country. Two datasets were extracted from the database, focussing on species interactions and species distribution, based on evidence published between 1950–2012. The quality of their evidence was checked and verified against well-known, alternative, datasets of pathogens infecting humans, domestic animals and wild mammals. The presented datasets provide a valuable resource for researchers of infectious diseases of humans and animals, including zoonoses.
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spelling pubmed-45701502015-09-23 Database of host-pathogen and related species interactions, and their global distribution Wardeh, Maya Risley, Claire McIntyre, Marie Kirsty Setzkorn, Christian Baylis, Matthew Sci Data Data Descriptor Interactions between species, particularly where one is likely to be a pathogen of the other, as well as the geographical distribution of species, have been systematically extracted from various web-based, free-access sources, and assembled with the accompanying evidence into a single database. The database attempts to answer questions such as what are all the pathogens of a host, and what are all the hosts of a pathogen, what are all the countries where a pathogen was found, and what are all the pathogens found in a country. Two datasets were extracted from the database, focussing on species interactions and species distribution, based on evidence published between 1950–2012. The quality of their evidence was checked and verified against well-known, alternative, datasets of pathogens infecting humans, domestic animals and wild mammals. The presented datasets provide a valuable resource for researchers of infectious diseases of humans and animals, including zoonoses. Nature Publishing Group 2015-09-15 /pmc/articles/PMC4570150/ /pubmed/26401317 http://dx.doi.org/10.1038/sdata.2015.49 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse.
spellingShingle Data Descriptor
Wardeh, Maya
Risley, Claire
McIntyre, Marie Kirsty
Setzkorn, Christian
Baylis, Matthew
Database of host-pathogen and related species interactions, and their global distribution
title Database of host-pathogen and related species interactions, and their global distribution
title_full Database of host-pathogen and related species interactions, and their global distribution
title_fullStr Database of host-pathogen and related species interactions, and their global distribution
title_full_unstemmed Database of host-pathogen and related species interactions, and their global distribution
title_short Database of host-pathogen and related species interactions, and their global distribution
title_sort database of host-pathogen and related species interactions, and their global distribution
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4570150/
https://www.ncbi.nlm.nih.gov/pubmed/26401317
http://dx.doi.org/10.1038/sdata.2015.49
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