Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood

An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophil...

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Detalles Bibliográficos
Autores principales: Lee, Hae-Won, Kim, Dae-Won, Lee, Mi-Hwa, Kim, Byung-Yong, Cho, Yong-Joon, Yim, Kyung June, Song, Hye Seon, Rhee, Jin-Kyu, Seo, Myung-Ji, Choi, Hak-Jong, Choi, Jong-Soon, Lee, Dong-Gi, Yoon, Changmann, Nam, Young-Do, Roh, Seong Woon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4571117/
https://www.ncbi.nlm.nih.gov/pubmed/26380039
http://dx.doi.org/10.1186/s40793-015-0051-8
Descripción
Sumario:An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.

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