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High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy

Rhizobium sullae strain WSM1592 is an aerobic, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen (N(2)) fixing root nodule formed on the short-lived perennial legume Hedysarum coronarium (also known as Sulla coronaria or Sulla). WSM1592 was isolated from a nodule reco...

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Autores principales: Yates, Ron, Howieson, John, De Meyer, Sofie E., Tian, Rui, Seshadri, Rekha, Pati, Amrita, Woyke, Tanja, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Loi, Angelo, Nutt, Brad, Garau, Giovanni, Sulas, Leonardo, Reeve, Wayne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572446/
https://www.ncbi.nlm.nih.gov/pubmed/26380632
http://dx.doi.org/10.1186/s40793-015-0020-2
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author Yates, Ron
Howieson, John
De Meyer, Sofie E.
Tian, Rui
Seshadri, Rekha
Pati, Amrita
Woyke, Tanja
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Loi, Angelo
Nutt, Brad
Garau, Giovanni
Sulas, Leonardo
Reeve, Wayne
author_facet Yates, Ron
Howieson, John
De Meyer, Sofie E.
Tian, Rui
Seshadri, Rekha
Pati, Amrita
Woyke, Tanja
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Loi, Angelo
Nutt, Brad
Garau, Giovanni
Sulas, Leonardo
Reeve, Wayne
author_sort Yates, Ron
collection PubMed
description Rhizobium sullae strain WSM1592 is an aerobic, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen (N(2)) fixing root nodule formed on the short-lived perennial legume Hedysarum coronarium (also known as Sulla coronaria or Sulla). WSM1592 was isolated from a nodule recovered from H. coronarium roots located in Ottava, bordering Sassari, Sardinia in 1995. WSM1592 is highly effective at fixing nitrogen with H. coronarium, and is currently the commercial Sulla inoculant strain in Australia. Here we describe the features of R. sullae strain WSM1592, together with genome sequence information and its annotation. The 7,530,820 bp high-quality permanent draft genome is arranged into 118 scaffolds of 118 contigs containing 7.453 protein-coding genes and 73 RNA-only encoding genes. This rhizobial genome is sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0020-2) contains supplementary material, which is available to authorized users.
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spelling pubmed-45724462015-09-18 High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy Yates, Ron Howieson, John De Meyer, Sofie E. Tian, Rui Seshadri, Rekha Pati, Amrita Woyke, Tanja Markowitz, Victor Ivanova, Natalia Kyrpides, Nikos Loi, Angelo Nutt, Brad Garau, Giovanni Sulas, Leonardo Reeve, Wayne Stand Genomic Sci Short Genome Report Rhizobium sullae strain WSM1592 is an aerobic, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen (N(2)) fixing root nodule formed on the short-lived perennial legume Hedysarum coronarium (also known as Sulla coronaria or Sulla). WSM1592 was isolated from a nodule recovered from H. coronarium roots located in Ottava, bordering Sassari, Sardinia in 1995. WSM1592 is highly effective at fixing nitrogen with H. coronarium, and is currently the commercial Sulla inoculant strain in Australia. Here we describe the features of R. sullae strain WSM1592, together with genome sequence information and its annotation. The 7,530,820 bp high-quality permanent draft genome is arranged into 118 scaffolds of 118 contigs containing 7.453 protein-coding genes and 73 RNA-only encoding genes. This rhizobial genome is sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0020-2) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-24 /pmc/articles/PMC4572446/ /pubmed/26380632 http://dx.doi.org/10.1186/s40793-015-0020-2 Text en © Yates et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Yates, Ron
Howieson, John
De Meyer, Sofie E.
Tian, Rui
Seshadri, Rekha
Pati, Amrita
Woyke, Tanja
Markowitz, Victor
Ivanova, Natalia
Kyrpides, Nikos
Loi, Angelo
Nutt, Brad
Garau, Giovanni
Sulas, Leonardo
Reeve, Wayne
High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title_full High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title_fullStr High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title_full_unstemmed High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title_short High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy
title_sort high-quality permanent draft genome sequence of rhizobium sullae strain wsm1592; a hedysarum coronarium microsymbiont from sassari, italy
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572446/
https://www.ncbi.nlm.nih.gov/pubmed/26380632
http://dx.doi.org/10.1186/s40793-015-0020-2
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