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Draft-genome sequence of Shewanella algae strain C6G3

Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, an...

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Autores principales: Aigle, Axel, Michotey, Valerie, Bonin, Patricia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572631/
https://www.ncbi.nlm.nih.gov/pubmed/26380631
http://dx.doi.org/10.1186/s40793-015-0022-0
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author Aigle, Axel
Michotey, Valerie
Bonin, Patricia
author_facet Aigle, Axel
Michotey, Valerie
Bonin, Patricia
author_sort Aigle, Axel
collection PubMed
description Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, and presents a great metabolic versatility. Here, we present the non-contiguous draft-genome sequence of Shewanella algae C6G3, which consists of a 4,879,425 bp. The chromosome contains 5792 predicted genes. In total, the genome consists of 24 rRNA genes, 86 tRNA genes and 5660 genes assigned as protein-coding genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0022-0) contains supplementary material, which is available to authorized users.
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spelling pubmed-45726312015-09-18 Draft-genome sequence of Shewanella algae strain C6G3 Aigle, Axel Michotey, Valerie Bonin, Patricia Stand Genomic Sci Short Genome Report Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, and presents a great metabolic versatility. Here, we present the non-contiguous draft-genome sequence of Shewanella algae C6G3, which consists of a 4,879,425 bp. The chromosome contains 5792 predicted genes. In total, the genome consists of 24 rRNA genes, 86 tRNA genes and 5660 genes assigned as protein-coding genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0022-0) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-23 /pmc/articles/PMC4572631/ /pubmed/26380631 http://dx.doi.org/10.1186/s40793-015-0022-0 Text en © Aigle et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Aigle, Axel
Michotey, Valerie
Bonin, Patricia
Draft-genome sequence of Shewanella algae strain C6G3
title Draft-genome sequence of Shewanella algae strain C6G3
title_full Draft-genome sequence of Shewanella algae strain C6G3
title_fullStr Draft-genome sequence of Shewanella algae strain C6G3
title_full_unstemmed Draft-genome sequence of Shewanella algae strain C6G3
title_short Draft-genome sequence of Shewanella algae strain C6G3
title_sort draft-genome sequence of shewanella algae strain c6g3
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572631/
https://www.ncbi.nlm.nih.gov/pubmed/26380631
http://dx.doi.org/10.1186/s40793-015-0022-0
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