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Draft-genome sequence of Shewanella algae strain C6G3
Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, an...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572631/ https://www.ncbi.nlm.nih.gov/pubmed/26380631 http://dx.doi.org/10.1186/s40793-015-0022-0 |
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author | Aigle, Axel Michotey, Valerie Bonin, Patricia |
author_facet | Aigle, Axel Michotey, Valerie Bonin, Patricia |
author_sort | Aigle, Axel |
collection | PubMed |
description | Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, and presents a great metabolic versatility. Here, we present the non-contiguous draft-genome sequence of Shewanella algae C6G3, which consists of a 4,879,425 bp. The chromosome contains 5792 predicted genes. In total, the genome consists of 24 rRNA genes, 86 tRNA genes and 5660 genes assigned as protein-coding genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0022-0) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4572631 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45726312015-09-18 Draft-genome sequence of Shewanella algae strain C6G3 Aigle, Axel Michotey, Valerie Bonin, Patricia Stand Genomic Sci Short Genome Report Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, and presents a great metabolic versatility. Here, we present the non-contiguous draft-genome sequence of Shewanella algae C6G3, which consists of a 4,879,425 bp. The chromosome contains 5792 predicted genes. In total, the genome consists of 24 rRNA genes, 86 tRNA genes and 5660 genes assigned as protein-coding genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0022-0) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-23 /pmc/articles/PMC4572631/ /pubmed/26380631 http://dx.doi.org/10.1186/s40793-015-0022-0 Text en © Aigle et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Aigle, Axel Michotey, Valerie Bonin, Patricia Draft-genome sequence of Shewanella algae strain C6G3 |
title | Draft-genome sequence of Shewanella algae strain C6G3 |
title_full | Draft-genome sequence of Shewanella algae strain C6G3 |
title_fullStr | Draft-genome sequence of Shewanella algae strain C6G3 |
title_full_unstemmed | Draft-genome sequence of Shewanella algae strain C6G3 |
title_short | Draft-genome sequence of Shewanella algae strain C6G3 |
title_sort | draft-genome sequence of shewanella algae strain c6g3 |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572631/ https://www.ncbi.nlm.nih.gov/pubmed/26380631 http://dx.doi.org/10.1186/s40793-015-0022-0 |
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