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An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer
Establishing how a series of potentially important genes might relate to each other is relevant to understand the origin and evolution of illnesses, such as cancer. High-throughput biological experiments have played a critical role in providing information in this regard. A special challenge, howeve...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4573573/ https://www.ncbi.nlm.nih.gov/pubmed/26388997 http://dx.doi.org/10.3390/microarrays4020287 |
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author | Lorenzo, Enery Camacho-Caceres, Katia Ropelewski, Alexander J. Rosas, Juan Ortiz-Mojer, Michael Perez-Marty, Lynn Irizarry, Juan Gonzalez, Valerie Rodríguez, Jesús A. Cabrera-Rios, Mauricio Isaza, Clara |
author_facet | Lorenzo, Enery Camacho-Caceres, Katia Ropelewski, Alexander J. Rosas, Juan Ortiz-Mojer, Michael Perez-Marty, Lynn Irizarry, Juan Gonzalez, Valerie Rodríguez, Jesús A. Cabrera-Rios, Mauricio Isaza, Clara |
author_sort | Lorenzo, Enery |
collection | PubMed |
description | Establishing how a series of potentially important genes might relate to each other is relevant to understand the origin and evolution of illnesses, such as cancer. High-throughput biological experiments have played a critical role in providing information in this regard. A special challenge, however, is that of trying to conciliate information from separate microarray experiments to build a potential genetic signaling path. This work proposes a two-step analysis pipeline, based on optimization, to approach meta-analysis aiming to build a proxy for a genetic signaling path. |
format | Online Article Text |
id | pubmed-4573573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-45735732015-09-18 An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer Lorenzo, Enery Camacho-Caceres, Katia Ropelewski, Alexander J. Rosas, Juan Ortiz-Mojer, Michael Perez-Marty, Lynn Irizarry, Juan Gonzalez, Valerie Rodríguez, Jesús A. Cabrera-Rios, Mauricio Isaza, Clara Microarrays (Basel) Article Establishing how a series of potentially important genes might relate to each other is relevant to understand the origin and evolution of illnesses, such as cancer. High-throughput biological experiments have played a critical role in providing information in this regard. A special challenge, however, is that of trying to conciliate information from separate microarray experiments to build a potential genetic signaling path. This work proposes a two-step analysis pipeline, based on optimization, to approach meta-analysis aiming to build a proxy for a genetic signaling path. MDPI 2015-05-28 /pmc/articles/PMC4573573/ /pubmed/26388997 http://dx.doi.org/10.3390/microarrays4020287 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lorenzo, Enery Camacho-Caceres, Katia Ropelewski, Alexander J. Rosas, Juan Ortiz-Mojer, Michael Perez-Marty, Lynn Irizarry, Juan Gonzalez, Valerie Rodríguez, Jesús A. Cabrera-Rios, Mauricio Isaza, Clara An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title | An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title_full | An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title_fullStr | An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title_full_unstemmed | An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title_short | An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer |
title_sort | optimization-driven analysis pipeline to uncover biomarkers and signaling paths: cervix cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4573573/ https://www.ncbi.nlm.nih.gov/pubmed/26388997 http://dx.doi.org/10.3390/microarrays4020287 |
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