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Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011

BACKGROUND: Identifying ongoing tuberculosis infection sites is crucial for breaking chains of transmission in tuberculosis-prevalent urban areas. Previous studies have pointed out that detection of local accumulation of tuberculosis patients based on their residential addresses may be limited by a...

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Autores principales: Izumi, Kiyohiko, Ohkado, Akihiro, Uchimura, Kazuhiro, Murase, Yoshiro, Tatsumi, Yuriko, Kayebeta, Aya, Watanabe, Yu, Ishikawa, Nobukatsu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575109/
https://www.ncbi.nlm.nih.gov/pubmed/26382251
http://dx.doi.org/10.1371/journal.pone.0138831
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author Izumi, Kiyohiko
Ohkado, Akihiro
Uchimura, Kazuhiro
Murase, Yoshiro
Tatsumi, Yuriko
Kayebeta, Aya
Watanabe, Yu
Ishikawa, Nobukatsu
author_facet Izumi, Kiyohiko
Ohkado, Akihiro
Uchimura, Kazuhiro
Murase, Yoshiro
Tatsumi, Yuriko
Kayebeta, Aya
Watanabe, Yu
Ishikawa, Nobukatsu
author_sort Izumi, Kiyohiko
collection PubMed
description BACKGROUND: Identifying ongoing tuberculosis infection sites is crucial for breaking chains of transmission in tuberculosis-prevalent urban areas. Previous studies have pointed out that detection of local accumulation of tuberculosis patients based on their residential addresses may be limited by a lack of matching between residences and tuberculosis infection sites. This study aimed to identify possible tuberculosis hotspots using TB genotype clustering statuses and a concept of “activity space”, a place where patients spend most of their waking hours. We further compared the spatial distribution by different residential statuses and describe urban environmental features of the detected hotspots. METHODS: Culture-positive tuberculosis patients notified to Shinjuku city from 2003 to 2011 were enrolled in this case-based cross-sectional study, and their demographic and clinical information, TB genotype clustering statuses, and activity space were collected. Spatial statistics (Global Moran’s I and Getis-Ord Gi* statistics) identified significant hotspots in 152 census tracts, and urban environmental features and tuberculosis patients’ characteristics in these hotspots were assessed. RESULTS: Of the enrolled 643 culture-positive tuberculosis patients, 416 (64.2%) were general inhabitants, 42 (6.5%) were foreign-born people, and 184 were homeless people (28.6%). The percentage of overall genotype clustering was 43.7%. Genotype-clustered general inhabitants and homeless people formed significant hotspots around a major railway station, whereas the non-clustered general inhabitants formed no hotspots. This suggested the detected hotspots of activity spaces may reflect ongoing tuberculosis transmission sites and were characterized by smaller residential floor size and a higher proportion of non-working households. CONCLUSIONS: Activity space-based spatial analysis suggested possible TB transmission sites around the major railway station and it can assist in further comprehension of TB transmission dynamics in an urban setting in Japan.
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spelling pubmed-45751092015-09-25 Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011 Izumi, Kiyohiko Ohkado, Akihiro Uchimura, Kazuhiro Murase, Yoshiro Tatsumi, Yuriko Kayebeta, Aya Watanabe, Yu Ishikawa, Nobukatsu PLoS One Research Article BACKGROUND: Identifying ongoing tuberculosis infection sites is crucial for breaking chains of transmission in tuberculosis-prevalent urban areas. Previous studies have pointed out that detection of local accumulation of tuberculosis patients based on their residential addresses may be limited by a lack of matching between residences and tuberculosis infection sites. This study aimed to identify possible tuberculosis hotspots using TB genotype clustering statuses and a concept of “activity space”, a place where patients spend most of their waking hours. We further compared the spatial distribution by different residential statuses and describe urban environmental features of the detected hotspots. METHODS: Culture-positive tuberculosis patients notified to Shinjuku city from 2003 to 2011 were enrolled in this case-based cross-sectional study, and their demographic and clinical information, TB genotype clustering statuses, and activity space were collected. Spatial statistics (Global Moran’s I and Getis-Ord Gi* statistics) identified significant hotspots in 152 census tracts, and urban environmental features and tuberculosis patients’ characteristics in these hotspots were assessed. RESULTS: Of the enrolled 643 culture-positive tuberculosis patients, 416 (64.2%) were general inhabitants, 42 (6.5%) were foreign-born people, and 184 were homeless people (28.6%). The percentage of overall genotype clustering was 43.7%. Genotype-clustered general inhabitants and homeless people formed significant hotspots around a major railway station, whereas the non-clustered general inhabitants formed no hotspots. This suggested the detected hotspots of activity spaces may reflect ongoing tuberculosis transmission sites and were characterized by smaller residential floor size and a higher proportion of non-working households. CONCLUSIONS: Activity space-based spatial analysis suggested possible TB transmission sites around the major railway station and it can assist in further comprehension of TB transmission dynamics in an urban setting in Japan. Public Library of Science 2015-09-18 /pmc/articles/PMC4575109/ /pubmed/26382251 http://dx.doi.org/10.1371/journal.pone.0138831 Text en © 2015 Izumi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Izumi, Kiyohiko
Ohkado, Akihiro
Uchimura, Kazuhiro
Murase, Yoshiro
Tatsumi, Yuriko
Kayebeta, Aya
Watanabe, Yu
Ishikawa, Nobukatsu
Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title_full Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title_fullStr Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title_full_unstemmed Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title_short Detection of Tuberculosis Infection Hotspots Using Activity Spaces Based Spatial Approach in an Urban Tokyo, from 2003 to 2011
title_sort detection of tuberculosis infection hotspots using activity spaces based spatial approach in an urban tokyo, from 2003 to 2011
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575109/
https://www.ncbi.nlm.nih.gov/pubmed/26382251
http://dx.doi.org/10.1371/journal.pone.0138831
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