Cargando…
Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification
Dengue is usually diagnosed by isolation of the virus, serology or molecular diagnostic methods. Several commercial kits for the diagnosis of dengue are existing, but concerns have arisen regarding to the affordability and performance characteristics of these kits. Hence, the loop-mediated isotherma...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575147/ https://www.ncbi.nlm.nih.gov/pubmed/26384248 http://dx.doi.org/10.1371/journal.pone.0138694 |
_version_ | 1782390737685446656 |
---|---|
author | Lau, Yee-Ling Lai, Meng-Yee Teoh, Boon-Teong Abd-Jamil, Juraina Johari, Jefree Sam, Sing-Sin Tan, Kim-Kee AbuBakar, Sazaly |
author_facet | Lau, Yee-Ling Lai, Meng-Yee Teoh, Boon-Teong Abd-Jamil, Juraina Johari, Jefree Sam, Sing-Sin Tan, Kim-Kee AbuBakar, Sazaly |
author_sort | Lau, Yee-Ling |
collection | PubMed |
description | Dengue is usually diagnosed by isolation of the virus, serology or molecular diagnostic methods. Several commercial kits for the diagnosis of dengue are existing, but concerns have arisen regarding to the affordability and performance characteristics of these kits. Hence, the loop-mediated isothermal amplification (LAMP) is potentially ideal to be used especially in resource limited environments. Serum was collected from healthy donors and patients diagnosed with dengue infection. RNA extracted from the serum samples were tested by reverse-transcription-LAMP assay developed based on 3′-NCR gene sequences for DENV 1–4. Results were interpreted by a turbidity meter in real time or visually at the end of the assay. Sensitivity and specificity of RT-LAMP results were calculated and compared to qRT-PCR and ELISA. RT-LAMP is highly sensitive with the detection limit of 10 RNA copies for all serotypes. Dengue virus RNA was detected in all positive samples using RT-LAMP and none of the negative samples within 30–45 minutes. With continuing efforts in the optimization of this assay, RT-LAMP may provide a simple and reliable test for detecting DENV in areas where dengue is prevalent. |
format | Online Article Text |
id | pubmed-4575147 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45751472015-09-25 Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification Lau, Yee-Ling Lai, Meng-Yee Teoh, Boon-Teong Abd-Jamil, Juraina Johari, Jefree Sam, Sing-Sin Tan, Kim-Kee AbuBakar, Sazaly PLoS One Research Article Dengue is usually diagnosed by isolation of the virus, serology or molecular diagnostic methods. Several commercial kits for the diagnosis of dengue are existing, but concerns have arisen regarding to the affordability and performance characteristics of these kits. Hence, the loop-mediated isothermal amplification (LAMP) is potentially ideal to be used especially in resource limited environments. Serum was collected from healthy donors and patients diagnosed with dengue infection. RNA extracted from the serum samples were tested by reverse-transcription-LAMP assay developed based on 3′-NCR gene sequences for DENV 1–4. Results were interpreted by a turbidity meter in real time or visually at the end of the assay. Sensitivity and specificity of RT-LAMP results were calculated and compared to qRT-PCR and ELISA. RT-LAMP is highly sensitive with the detection limit of 10 RNA copies for all serotypes. Dengue virus RNA was detected in all positive samples using RT-LAMP and none of the negative samples within 30–45 minutes. With continuing efforts in the optimization of this assay, RT-LAMP may provide a simple and reliable test for detecting DENV in areas where dengue is prevalent. Public Library of Science 2015-09-18 /pmc/articles/PMC4575147/ /pubmed/26384248 http://dx.doi.org/10.1371/journal.pone.0138694 Text en © 2015 Lau et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Lau, Yee-Ling Lai, Meng-Yee Teoh, Boon-Teong Abd-Jamil, Juraina Johari, Jefree Sam, Sing-Sin Tan, Kim-Kee AbuBakar, Sazaly Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title | Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title_full | Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title_fullStr | Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title_full_unstemmed | Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title_short | Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification |
title_sort | colorimetric detection of dengue by single tube reverse-transcription-loop-mediated isothermal amplification |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575147/ https://www.ncbi.nlm.nih.gov/pubmed/26384248 http://dx.doi.org/10.1371/journal.pone.0138694 |
work_keys_str_mv | AT lauyeeling colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT laimengyee colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT teohboonteong colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT abdjamiljuraina colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT joharijefree colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT samsingsin colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT tankimkee colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification AT abubakarsazaly colorimetricdetectionofdenguebysingletubereversetranscriptionloopmediatedisothermalamplification |