High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)

Flavihumibacter solisilvae 3-3(T) (= KACC 17917(T) = JCM 19891(T)) represents a type strain of the genus Flavihumibacter within the family Chitinophagaceae. This strain can use various sole carbon sources, making it applicable in industry and bioremediation. In this study, the draft genomic informat...

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Autores principales: Zhou, Gang, Chen, Chong, Jeon, Che Ok, Wang, Gejiao, Li, Mingshun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575449/
https://www.ncbi.nlm.nih.gov/pubmed/26388970
http://dx.doi.org/10.1186/s40793-015-0037-6
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author Zhou, Gang
Chen, Chong
Jeon, Che Ok
Wang, Gejiao
Li, Mingshun
author_facet Zhou, Gang
Chen, Chong
Jeon, Che Ok
Wang, Gejiao
Li, Mingshun
author_sort Zhou, Gang
collection PubMed
description Flavihumibacter solisilvae 3-3(T) (= KACC 17917(T) = JCM 19891(T)) represents a type strain of the genus Flavihumibacter within the family Chitinophagaceae. This strain can use various sole carbon sources, making it applicable in industry and bioremediation. In this study, the draft genomic information of F. solisilvae 3-3(T) is described. F. solisilvae 3-3(T) owns a genome size of 5.41 Mbp, 47 % GC content and a total of 4,698 genes, including 4,215 protein coding genes, 439 pseudo genes and 44 RNA encoding genes. Analysis of its genome reveals high correlation between the genotypes and the phenotypes.
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spelling pubmed-45754492015-09-20 High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T) Zhou, Gang Chen, Chong Jeon, Che Ok Wang, Gejiao Li, Mingshun Stand Genomic Sci Short Genome Report Flavihumibacter solisilvae 3-3(T) (= KACC 17917(T) = JCM 19891(T)) represents a type strain of the genus Flavihumibacter within the family Chitinophagaceae. This strain can use various sole carbon sources, making it applicable in industry and bioremediation. In this study, the draft genomic information of F. solisilvae 3-3(T) is described. F. solisilvae 3-3(T) owns a genome size of 5.41 Mbp, 47 % GC content and a total of 4,698 genes, including 4,215 protein coding genes, 439 pseudo genes and 44 RNA encoding genes. Analysis of its genome reveals high correlation between the genotypes and the phenotypes. BioMed Central 2015-09-19 /pmc/articles/PMC4575449/ /pubmed/26388970 http://dx.doi.org/10.1186/s40793-015-0037-6 Text en © Zhou et al. 2015 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Zhou, Gang
Chen, Chong
Jeon, Che Ok
Wang, Gejiao
Li, Mingshun
High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title_full High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title_fullStr High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title_full_unstemmed High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title_short High quality draft genomic sequence of Flavihumibacter solisilvae 3-3(T)
title_sort high quality draft genomic sequence of flavihumibacter solisilvae 3-3(t)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4575449/
https://www.ncbi.nlm.nih.gov/pubmed/26388970
http://dx.doi.org/10.1186/s40793-015-0037-6
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