Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis

‘Treponema phagedenis’ is considered to be a key agent in the pathogenesis of bovine digital dermatitis, an infectious foot condition of economic and animal welfare importance. We hereby report the draft sequence of ‘T. phagedenis’ strain V1. The draft genome assembly consists of 51 scaffolds compri...

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Autores principales: Mushtaq, Mamoona, Manzoor, Shahid, Pringle, Märit, Rosander, Anna, Bongcam-Rudloff, Erik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4576374/
https://www.ncbi.nlm.nih.gov/pubmed/26392840
http://dx.doi.org/10.1186/s40793-015-0059-0
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author Mushtaq, Mamoona
Manzoor, Shahid
Pringle, Märit
Rosander, Anna
Bongcam-Rudloff, Erik
author_facet Mushtaq, Mamoona
Manzoor, Shahid
Pringle, Märit
Rosander, Anna
Bongcam-Rudloff, Erik
author_sort Mushtaq, Mamoona
collection PubMed
description ‘Treponema phagedenis’ is considered to be a key agent in the pathogenesis of bovine digital dermatitis, an infectious foot condition of economic and animal welfare importance. We hereby report the draft sequence of ‘T. phagedenis’ strain V1. The draft genome assembly consists of 51 scaffolds comprising 3,129,551 bp and a GC-content of 39.9 %. Putative pathogenicity related factors have been identified in the genome that can be used in future studies to gain insight into the pathogenic mechanisms of ‘T. phagedenis’. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0059-0) contains supplementary material, which is available to authorized users.
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spelling pubmed-45763742015-09-22 Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis Mushtaq, Mamoona Manzoor, Shahid Pringle, Märit Rosander, Anna Bongcam-Rudloff, Erik Stand Genomic Sci Short Genome Report ‘Treponema phagedenis’ is considered to be a key agent in the pathogenesis of bovine digital dermatitis, an infectious foot condition of economic and animal welfare importance. We hereby report the draft sequence of ‘T. phagedenis’ strain V1. The draft genome assembly consists of 51 scaffolds comprising 3,129,551 bp and a GC-content of 39.9 %. Putative pathogenicity related factors have been identified in the genome that can be used in future studies to gain insight into the pathogenic mechanisms of ‘T. phagedenis’. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0059-0) contains supplementary material, which is available to authorized users. BioMed Central 2015-09-21 /pmc/articles/PMC4576374/ /pubmed/26392840 http://dx.doi.org/10.1186/s40793-015-0059-0 Text en © Mushtaq et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Mushtaq, Mamoona
Manzoor, Shahid
Pringle, Märit
Rosander, Anna
Bongcam-Rudloff, Erik
Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title_full Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title_fullStr Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title_full_unstemmed Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title_short Draft genome sequence of ‘Treponema phagedenis’ strain V1, isolated from bovine digital dermatitis
title_sort draft genome sequence of ‘treponema phagedenis’ strain v1, isolated from bovine digital dermatitis
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4576374/
https://www.ncbi.nlm.nih.gov/pubmed/26392840
http://dx.doi.org/10.1186/s40793-015-0059-0
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