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Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds

The elevated rate of evolution for genes on sex chromosomes compared with autosomes (Fast-X or Fast-Z evolution) can result either from positive selection in the heterogametic sex or from nonadaptive consequences of reduced relative effective population size. Recent work in birds suggests that Fast-...

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Autores principales: Dean, Rebecca, Harrison, Peter W., Wright, Alison E., Zimmer, Fabian, Mank, Judith E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4576705/
https://www.ncbi.nlm.nih.gov/pubmed/26067773
http://dx.doi.org/10.1093/molbev/msv138
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author Dean, Rebecca
Harrison, Peter W.
Wright, Alison E.
Zimmer, Fabian
Mank, Judith E.
author_facet Dean, Rebecca
Harrison, Peter W.
Wright, Alison E.
Zimmer, Fabian
Mank, Judith E.
author_sort Dean, Rebecca
collection PubMed
description The elevated rate of evolution for genes on sex chromosomes compared with autosomes (Fast-X or Fast-Z evolution) can result either from positive selection in the heterogametic sex or from nonadaptive consequences of reduced relative effective population size. Recent work in birds suggests that Fast-Z of coding sequence is primarily due to relaxed purifying selection resulting from reduced relative effective population size. However, gene sequence and gene expression are often subject to distinct evolutionary pressures; therefore, we tested for Fast-Z in gene expression using next-generation RNA-sequencing data from multiple avian species. Similar to studies of Fast-Z in coding sequence, we recover clear signatures of Fast-Z in gene expression; however, in contrast to coding sequence, our data indicate that Fast-Z in expression is due to positive selection acting primarily in females. In the soma, where gene expression is highly correlated between the sexes, we detected Fast-Z in both sexes, although at a higher rate in females, suggesting that many positively selected expression changes in females are also expressed in males. In the gonad, where intersexual correlations in expression are much lower, we detected Fast-Z for female gene expression, but crucially, not males. This suggests that a large amount of expression variation is sex-specific in its effects within the gonad. Taken together, our results indicate that Fast-Z evolution of gene expression is the product of positive selection acting on recessive beneficial alleles in the heterogametic sex. More broadly, our analysis suggests that the adaptive potential of Z chromosome gene expression may be much greater than that of gene sequence, results which have important implications for the role of sex chromosomes in speciation and sexual selection.
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spelling pubmed-45767052015-09-25 Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds Dean, Rebecca Harrison, Peter W. Wright, Alison E. Zimmer, Fabian Mank, Judith E. Mol Biol Evol Discoveries The elevated rate of evolution for genes on sex chromosomes compared with autosomes (Fast-X or Fast-Z evolution) can result either from positive selection in the heterogametic sex or from nonadaptive consequences of reduced relative effective population size. Recent work in birds suggests that Fast-Z of coding sequence is primarily due to relaxed purifying selection resulting from reduced relative effective population size. However, gene sequence and gene expression are often subject to distinct evolutionary pressures; therefore, we tested for Fast-Z in gene expression using next-generation RNA-sequencing data from multiple avian species. Similar to studies of Fast-Z in coding sequence, we recover clear signatures of Fast-Z in gene expression; however, in contrast to coding sequence, our data indicate that Fast-Z in expression is due to positive selection acting primarily in females. In the soma, where gene expression is highly correlated between the sexes, we detected Fast-Z in both sexes, although at a higher rate in females, suggesting that many positively selected expression changes in females are also expressed in males. In the gonad, where intersexual correlations in expression are much lower, we detected Fast-Z for female gene expression, but crucially, not males. This suggests that a large amount of expression variation is sex-specific in its effects within the gonad. Taken together, our results indicate that Fast-Z evolution of gene expression is the product of positive selection acting on recessive beneficial alleles in the heterogametic sex. More broadly, our analysis suggests that the adaptive potential of Z chromosome gene expression may be much greater than that of gene sequence, results which have important implications for the role of sex chromosomes in speciation and sexual selection. Oxford University Press 2015-10 2015-06-10 /pmc/articles/PMC4576705/ /pubmed/26067773 http://dx.doi.org/10.1093/molbev/msv138 Text en © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Discoveries
Dean, Rebecca
Harrison, Peter W.
Wright, Alison E.
Zimmer, Fabian
Mank, Judith E.
Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title_full Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title_fullStr Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title_full_unstemmed Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title_short Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds
title_sort positive selection underlies faster-z evolution of gene expression in birds
topic Discoveries
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4576705/
https://www.ncbi.nlm.nih.gov/pubmed/26067773
http://dx.doi.org/10.1093/molbev/msv138
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