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X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC

The N-isopropylammelide isopropylaminohydrolase from Pseudomonas sp. strain ADP, AtzC, provides the third hydrolytic step in the mineralization of s-triazine herbicides, such as atrazine. We obtained the X-ray crystal structure of AtzC at 1.84 Å with a weak inhibitor bound in the active site and the...

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Autores principales: Balotra, Sahil, Warden, Andrew C., Newman, Janet, Briggs, Lyndall J., Scott, Colin, Peat, Thomas S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4577212/
https://www.ncbi.nlm.nih.gov/pubmed/26390431
http://dx.doi.org/10.1371/journal.pone.0137700
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author Balotra, Sahil
Warden, Andrew C.
Newman, Janet
Briggs, Lyndall J.
Scott, Colin
Peat, Thomas S.
author_facet Balotra, Sahil
Warden, Andrew C.
Newman, Janet
Briggs, Lyndall J.
Scott, Colin
Peat, Thomas S.
author_sort Balotra, Sahil
collection PubMed
description The N-isopropylammelide isopropylaminohydrolase from Pseudomonas sp. strain ADP, AtzC, provides the third hydrolytic step in the mineralization of s-triazine herbicides, such as atrazine. We obtained the X-ray crystal structure of AtzC at 1.84 Å with a weak inhibitor bound in the active site and then used a combination of in silico docking and site-directed mutagenesis to understand the interactions between AtzC and its substrate, isopropylammelide. The substitution of an active site histidine residue (His249) for an alanine abolished the enzyme’s catalytic activity. We propose a plausible catalytic mechanism, consistent with the biochemical and crystallographic data obtained that is similar to that found in carbonic anhydrase and other members of subtype III of the amidohydrolase family
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spelling pubmed-45772122015-09-25 X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC Balotra, Sahil Warden, Andrew C. Newman, Janet Briggs, Lyndall J. Scott, Colin Peat, Thomas S. PLoS One Research Article The N-isopropylammelide isopropylaminohydrolase from Pseudomonas sp. strain ADP, AtzC, provides the third hydrolytic step in the mineralization of s-triazine herbicides, such as atrazine. We obtained the X-ray crystal structure of AtzC at 1.84 Å with a weak inhibitor bound in the active site and then used a combination of in silico docking and site-directed mutagenesis to understand the interactions between AtzC and its substrate, isopropylammelide. The substitution of an active site histidine residue (His249) for an alanine abolished the enzyme’s catalytic activity. We propose a plausible catalytic mechanism, consistent with the biochemical and crystallographic data obtained that is similar to that found in carbonic anhydrase and other members of subtype III of the amidohydrolase family Public Library of Science 2015-09-21 /pmc/articles/PMC4577212/ /pubmed/26390431 http://dx.doi.org/10.1371/journal.pone.0137700 Text en © 2015 Balotra et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Balotra, Sahil
Warden, Andrew C.
Newman, Janet
Briggs, Lyndall J.
Scott, Colin
Peat, Thomas S.
X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title_full X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title_fullStr X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title_full_unstemmed X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title_short X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, AtzC
title_sort x-ray structure and mutagenesis studies of the n-isopropylammelide isopropylaminohydrolase, atzc
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4577212/
https://www.ncbi.nlm.nih.gov/pubmed/26390431
http://dx.doi.org/10.1371/journal.pone.0137700
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