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Digitization workflows for flat sheets and packets of plants, algae, and fungi(1)
Effective workflows are essential components in the digitization of biodiversity specimen collections. To date, no comprehensive, community-vetted workflows have been published for digitizing flat sheets and packets of plants, algae, and fungi, even though latest estimates suggest that only 33% of h...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578381/ https://www.ncbi.nlm.nih.gov/pubmed/26421256 http://dx.doi.org/10.3732/apps.1500065 |
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author | Nelson, Gil Sweeney, Patrick Wallace, Lisa E. Rabeler, Richard K. Allard, Dorothy Brown, Herrick Carter, J. Richard Denslow, Michael W. Ellwood, Elizabeth R. Germain-Aubrey, Charlotte C. Gilbert, Ed Gillespie, Emily Goertzen, Leslie R. Legler, Ben Marchant, D. Blaine Marsico, Travis D. Morris, Ashley B. Murrell, Zack Nazaire, Mare Neefus, Chris Oberreiter, Shanna Paul, Deborah Ruhfel, Brad R. Sasek, Thomas Shaw, Joey Soltis, Pamela S. Watson, Kimberly Weeks, Andrea Mast, Austin R. |
author_facet | Nelson, Gil Sweeney, Patrick Wallace, Lisa E. Rabeler, Richard K. Allard, Dorothy Brown, Herrick Carter, J. Richard Denslow, Michael W. Ellwood, Elizabeth R. Germain-Aubrey, Charlotte C. Gilbert, Ed Gillespie, Emily Goertzen, Leslie R. Legler, Ben Marchant, D. Blaine Marsico, Travis D. Morris, Ashley B. Murrell, Zack Nazaire, Mare Neefus, Chris Oberreiter, Shanna Paul, Deborah Ruhfel, Brad R. Sasek, Thomas Shaw, Joey Soltis, Pamela S. Watson, Kimberly Weeks, Andrea Mast, Austin R. |
author_sort | Nelson, Gil |
collection | PubMed |
description | Effective workflows are essential components in the digitization of biodiversity specimen collections. To date, no comprehensive, community-vetted workflows have been published for digitizing flat sheets and packets of plants, algae, and fungi, even though latest estimates suggest that only 33% of herbarium specimens have been digitally transcribed, 54% of herbaria use a specimen database, and 24% are imaging specimens. In 2012, iDigBio, the U.S. National Science Foundation’s (NSF) coordinating center and national resource for the digitization of public, nonfederal U.S. collections, launched several working groups to address this deficiency. Here, we report the development of 14 workflow modules with 7–36 tasks each. These workflows represent the combined work of approximately 35 curators, directors, and collections managers representing more than 30 herbaria, including 15 NSF-supported plant-related Thematic Collections Networks and collaboratives. The workflows are provided for download as Portable Document Format (PDF) and Microsoft Word files. Customization of these workflows for specific institutional implementation is encouraged. |
format | Online Article Text |
id | pubmed-4578381 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-45783812015-09-29 Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) Nelson, Gil Sweeney, Patrick Wallace, Lisa E. Rabeler, Richard K. Allard, Dorothy Brown, Herrick Carter, J. Richard Denslow, Michael W. Ellwood, Elizabeth R. Germain-Aubrey, Charlotte C. Gilbert, Ed Gillespie, Emily Goertzen, Leslie R. Legler, Ben Marchant, D. Blaine Marsico, Travis D. Morris, Ashley B. Murrell, Zack Nazaire, Mare Neefus, Chris Oberreiter, Shanna Paul, Deborah Ruhfel, Brad R. Sasek, Thomas Shaw, Joey Soltis, Pamela S. Watson, Kimberly Weeks, Andrea Mast, Austin R. Appl Plant Sci Review Article Effective workflows are essential components in the digitization of biodiversity specimen collections. To date, no comprehensive, community-vetted workflows have been published for digitizing flat sheets and packets of plants, algae, and fungi, even though latest estimates suggest that only 33% of herbarium specimens have been digitally transcribed, 54% of herbaria use a specimen database, and 24% are imaging specimens. In 2012, iDigBio, the U.S. National Science Foundation’s (NSF) coordinating center and national resource for the digitization of public, nonfederal U.S. collections, launched several working groups to address this deficiency. Here, we report the development of 14 workflow modules with 7–36 tasks each. These workflows represent the combined work of approximately 35 curators, directors, and collections managers representing more than 30 herbaria, including 15 NSF-supported plant-related Thematic Collections Networks and collaboratives. The workflows are provided for download as Portable Document Format (PDF) and Microsoft Word files. Customization of these workflows for specific institutional implementation is encouraged. Botanical Society of America 2015-09-10 /pmc/articles/PMC4578381/ /pubmed/26421256 http://dx.doi.org/10.3732/apps.1500065 Text en © 2015 Nelson et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Review Article Nelson, Gil Sweeney, Patrick Wallace, Lisa E. Rabeler, Richard K. Allard, Dorothy Brown, Herrick Carter, J. Richard Denslow, Michael W. Ellwood, Elizabeth R. Germain-Aubrey, Charlotte C. Gilbert, Ed Gillespie, Emily Goertzen, Leslie R. Legler, Ben Marchant, D. Blaine Marsico, Travis D. Morris, Ashley B. Murrell, Zack Nazaire, Mare Neefus, Chris Oberreiter, Shanna Paul, Deborah Ruhfel, Brad R. Sasek, Thomas Shaw, Joey Soltis, Pamela S. Watson, Kimberly Weeks, Andrea Mast, Austin R. Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title | Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title_full | Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title_fullStr | Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title_full_unstemmed | Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title_short | Digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
title_sort | digitization workflows for flat sheets and packets of plants, algae, and fungi(1) |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578381/ https://www.ncbi.nlm.nih.gov/pubmed/26421256 http://dx.doi.org/10.3732/apps.1500065 |
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