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The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field

The Nanomaterial Data Curation Initiative (NDCI), a project of the National Cancer Informatics Program Nanotechnology Working Group (NCIP NanoWG), explores the critical aspect of data curation within the development of informatics approaches to understanding nanomaterial behavior. Data repositories...

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Detalles Bibliográficos
Autores principales: Hendren, Christine Ogilvie, Powers, Christina M, Hoover, Mark D, Harper, Stacey L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578388/
https://www.ncbi.nlm.nih.gov/pubmed/26425427
http://dx.doi.org/10.3762/bjnano.6.179
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author Hendren, Christine Ogilvie
Powers, Christina M
Hoover, Mark D
Harper, Stacey L
author_facet Hendren, Christine Ogilvie
Powers, Christina M
Hoover, Mark D
Harper, Stacey L
author_sort Hendren, Christine Ogilvie
collection PubMed
description The Nanomaterial Data Curation Initiative (NDCI), a project of the National Cancer Informatics Program Nanotechnology Working Group (NCIP NanoWG), explores the critical aspect of data curation within the development of informatics approaches to understanding nanomaterial behavior. Data repositories and tools for integrating and interrogating complex nanomaterial datasets are gaining widespread interest, with multiple projects now appearing in the US and the EU. Even in these early stages of development, a single common aspect shared across all nanoinformatics resources is that data must be curated into them. Through exploration of sub-topics related to all activities necessary to enable, execute, and improve the curation process, the NDCI will provide a substantive analysis of nanomaterial data curation itself, as well as a platform for multiple other important discussions to advance the field of nanoinformatics. This article outlines the NDCI project and lays the foundation for a series of papers on nanomaterial data curation. The NDCI purpose is to: 1) present and evaluate the current state of nanomaterial data curation across the field on multiple specific data curation topics, 2) propose ways to leverage and advance progress for both individual efforts and the nanomaterial data community as a whole, and 3) provide opportunities for similar publication series on the details of the interactive needs and workflows of data customers, data creators, and data analysts. Initial responses from stakeholder liaisons throughout the nanoinformatics community reveal a shared view that it will be critical to focus on integration of datasets with specific orientation toward the purposes for which the individual resources were created, as well as the purpose for integrating multiple resources. Early acknowledgement and undertaking of complex topics such as uncertainty, reproducibility, and interoperability is proposed as an important path to addressing key challenges within the nanomaterial community, such as reducing collateral negative impacts and decreasing the time from development to market for this new class of technologies.
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spelling pubmed-45783882015-09-30 The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field Hendren, Christine Ogilvie Powers, Christina M Hoover, Mark D Harper, Stacey L Beilstein J Nanotechnol Full Research Paper The Nanomaterial Data Curation Initiative (NDCI), a project of the National Cancer Informatics Program Nanotechnology Working Group (NCIP NanoWG), explores the critical aspect of data curation within the development of informatics approaches to understanding nanomaterial behavior. Data repositories and tools for integrating and interrogating complex nanomaterial datasets are gaining widespread interest, with multiple projects now appearing in the US and the EU. Even in these early stages of development, a single common aspect shared across all nanoinformatics resources is that data must be curated into them. Through exploration of sub-topics related to all activities necessary to enable, execute, and improve the curation process, the NDCI will provide a substantive analysis of nanomaterial data curation itself, as well as a platform for multiple other important discussions to advance the field of nanoinformatics. This article outlines the NDCI project and lays the foundation for a series of papers on nanomaterial data curation. The NDCI purpose is to: 1) present and evaluate the current state of nanomaterial data curation across the field on multiple specific data curation topics, 2) propose ways to leverage and advance progress for both individual efforts and the nanomaterial data community as a whole, and 3) provide opportunities for similar publication series on the details of the interactive needs and workflows of data customers, data creators, and data analysts. Initial responses from stakeholder liaisons throughout the nanoinformatics community reveal a shared view that it will be critical to focus on integration of datasets with specific orientation toward the purposes for which the individual resources were created, as well as the purpose for integrating multiple resources. Early acknowledgement and undertaking of complex topics such as uncertainty, reproducibility, and interoperability is proposed as an important path to addressing key challenges within the nanomaterial community, such as reducing collateral negative impacts and decreasing the time from development to market for this new class of technologies. Beilstein-Institut 2015-08-18 /pmc/articles/PMC4578388/ /pubmed/26425427 http://dx.doi.org/10.3762/bjnano.6.179 Text en Copyright © 2015, Hendren et al. https://creativecommons.org/licenses/by/2.0https://www.beilstein-journals.org/bjnano/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The license is subject to the Beilstein Journal of Nanotechnology terms and conditions: (https://www.beilstein-journals.org/bjnano/terms)
spellingShingle Full Research Paper
Hendren, Christine Ogilvie
Powers, Christina M
Hoover, Mark D
Harper, Stacey L
The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title_full The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title_fullStr The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title_full_unstemmed The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title_short The Nanomaterial Data Curation Initiative: A collaborative approach to assessing, evaluating, and advancing the state of the field
title_sort nanomaterial data curation initiative: a collaborative approach to assessing, evaluating, and advancing the state of the field
topic Full Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578388/
https://www.ncbi.nlm.nih.gov/pubmed/26425427
http://dx.doi.org/10.3762/bjnano.6.179
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