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Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis

Campylobacter spp. are important causes of bacterial gastroenteritis in humans in developed countries. Among Campylobacter spp. Campylobacter jejuni (C. jejuni) and C. coli are the most common causes of human infection. In this study, a multiplex PCR (mPCR) and high resolution melt (HRM) curve analy...

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Autores principales: Banowary, Banya, Dang, Van Tuan, Sarker, Subir, Connolly, Joanne H., Chenu, Jeremy, Groves, Peter, Ayton, Michelle, Raidal, Shane, Devi, Aruna, Vanniasinkam, Thiru, Ghorashi, Seyed A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578860/
https://www.ncbi.nlm.nih.gov/pubmed/26394042
http://dx.doi.org/10.1371/journal.pone.0138808
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author Banowary, Banya
Dang, Van Tuan
Sarker, Subir
Connolly, Joanne H.
Chenu, Jeremy
Groves, Peter
Ayton, Michelle
Raidal, Shane
Devi, Aruna
Vanniasinkam, Thiru
Ghorashi, Seyed A.
author_facet Banowary, Banya
Dang, Van Tuan
Sarker, Subir
Connolly, Joanne H.
Chenu, Jeremy
Groves, Peter
Ayton, Michelle
Raidal, Shane
Devi, Aruna
Vanniasinkam, Thiru
Ghorashi, Seyed A.
author_sort Banowary, Banya
collection PubMed
description Campylobacter spp. are important causes of bacterial gastroenteritis in humans in developed countries. Among Campylobacter spp. Campylobacter jejuni (C. jejuni) and C. coli are the most common causes of human infection. In this study, a multiplex PCR (mPCR) and high resolution melt (HRM) curve analysis were optimized for simultaneous detection and differentiation of C. jejuni and C. coli isolates. A segment of the hippuricase gene (hipO) of C. jejuni and putative aspartokinase (asp) gene of C. coli were amplified from 26 Campylobacter isolates and amplicons were subjected to HRM curve analysis. The mPCR-HRM was able to differentiate between C. jejuni and C. coli species. All DNA amplicons generated by mPCR were sequenced. Analysis of the nucleotide sequences from each isolate revealed that the HRM curves were correlated with the nucleotide sequences of the amplicons. Minor variation in melting point temperatures of C. coli or C. jejuni isolates was also observed and enabled some intraspecies differentiation between C. coli and/or C. jejuni isolates. The potential of PCR-HRM curve analysis for the detection and speciation of Campylobacter in additional human clinical specimens and chicken swab samples was also confirmed. The sensitivity and specificity of the test were found to be 100% and 92%, respectively. The results indicated that mPCR followed by HRM curve analysis provides a rapid (8 hours) technique for differentiation between C. jejuni and C. coli isolates.
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spelling pubmed-45788602015-10-01 Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis Banowary, Banya Dang, Van Tuan Sarker, Subir Connolly, Joanne H. Chenu, Jeremy Groves, Peter Ayton, Michelle Raidal, Shane Devi, Aruna Vanniasinkam, Thiru Ghorashi, Seyed A. PLoS One Research Article Campylobacter spp. are important causes of bacterial gastroenteritis in humans in developed countries. Among Campylobacter spp. Campylobacter jejuni (C. jejuni) and C. coli are the most common causes of human infection. In this study, a multiplex PCR (mPCR) and high resolution melt (HRM) curve analysis were optimized for simultaneous detection and differentiation of C. jejuni and C. coli isolates. A segment of the hippuricase gene (hipO) of C. jejuni and putative aspartokinase (asp) gene of C. coli were amplified from 26 Campylobacter isolates and amplicons were subjected to HRM curve analysis. The mPCR-HRM was able to differentiate between C. jejuni and C. coli species. All DNA amplicons generated by mPCR were sequenced. Analysis of the nucleotide sequences from each isolate revealed that the HRM curves were correlated with the nucleotide sequences of the amplicons. Minor variation in melting point temperatures of C. coli or C. jejuni isolates was also observed and enabled some intraspecies differentiation between C. coli and/or C. jejuni isolates. The potential of PCR-HRM curve analysis for the detection and speciation of Campylobacter in additional human clinical specimens and chicken swab samples was also confirmed. The sensitivity and specificity of the test were found to be 100% and 92%, respectively. The results indicated that mPCR followed by HRM curve analysis provides a rapid (8 hours) technique for differentiation between C. jejuni and C. coli isolates. Public Library of Science 2015-09-22 /pmc/articles/PMC4578860/ /pubmed/26394042 http://dx.doi.org/10.1371/journal.pone.0138808 Text en © 2015 Banowary et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Banowary, Banya
Dang, Van Tuan
Sarker, Subir
Connolly, Joanne H.
Chenu, Jeremy
Groves, Peter
Ayton, Michelle
Raidal, Shane
Devi, Aruna
Vanniasinkam, Thiru
Ghorashi, Seyed A.
Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title_full Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title_fullStr Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title_full_unstemmed Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title_short Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis
title_sort differentiation of campylobacter jejuni and campylobacter coli using multiplex-pcr and high resolution melt curve analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578860/
https://www.ncbi.nlm.nih.gov/pubmed/26394042
http://dx.doi.org/10.1371/journal.pone.0138808
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