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3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles

Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree com...

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Autores principales: Gatziolis, Demetrios, Lienard, Jean F., Vogs, Andre, Strigul, Nikolay S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579125/
https://www.ncbi.nlm.nih.gov/pubmed/26393926
http://dx.doi.org/10.1371/journal.pone.0137765
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author Gatziolis, Demetrios
Lienard, Jean F.
Vogs, Andre
Strigul, Nikolay S.
author_facet Gatziolis, Demetrios
Lienard, Jean F.
Vogs, Andre
Strigul, Nikolay S.
author_sort Gatziolis, Demetrios
collection PubMed
description Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree components with precision has been constrained by technological and logistical limitations and cost. Traditional methods of forest biometrics provide only partial measurements and are labor intensive. Active remote technologies such as LiDAR operated from airborne platforms provide only partial crown reconstructions. The use of terrestrial LiDAR is laborious, has portability limitations and high cost. In this work we capitalized on recent improvements in the capabilities and availability of small unmanned aerial vehicles (UAVs), light and inexpensive cameras, and developed an affordable method for obtaining precise and comprehensive 3D models of trees and small groups of trees. The method employs slow-moving UAVs that acquire images along predefined trajectories near and around targeted trees, and computer vision-based approaches that process the images to obtain detailed tree reconstructions. After we confirmed the potential of the methodology via simulation we evaluated several UAV platforms, strategies for image acquisition, and image processing algorithms. We present an original, step-by-step workflow which utilizes open source programs and original software. We anticipate that future development and applications of our method will improve our understanding of forest self-organization emerging from the competition among trees, and will lead to a refined generation of individual-tree-based forest models.
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spelling pubmed-45791252015-10-01 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles Gatziolis, Demetrios Lienard, Jean F. Vogs, Andre Strigul, Nikolay S. PLoS One Research Article Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree components with precision has been constrained by technological and logistical limitations and cost. Traditional methods of forest biometrics provide only partial measurements and are labor intensive. Active remote technologies such as LiDAR operated from airborne platforms provide only partial crown reconstructions. The use of terrestrial LiDAR is laborious, has portability limitations and high cost. In this work we capitalized on recent improvements in the capabilities and availability of small unmanned aerial vehicles (UAVs), light and inexpensive cameras, and developed an affordable method for obtaining precise and comprehensive 3D models of trees and small groups of trees. The method employs slow-moving UAVs that acquire images along predefined trajectories near and around targeted trees, and computer vision-based approaches that process the images to obtain detailed tree reconstructions. After we confirmed the potential of the methodology via simulation we evaluated several UAV platforms, strategies for image acquisition, and image processing algorithms. We present an original, step-by-step workflow which utilizes open source programs and original software. We anticipate that future development and applications of our method will improve our understanding of forest self-organization emerging from the competition among trees, and will lead to a refined generation of individual-tree-based forest models. Public Library of Science 2015-09-22 /pmc/articles/PMC4579125/ /pubmed/26393926 http://dx.doi.org/10.1371/journal.pone.0137765 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Research Article
Gatziolis, Demetrios
Lienard, Jean F.
Vogs, Andre
Strigul, Nikolay S.
3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title_full 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title_fullStr 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title_full_unstemmed 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title_short 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles
title_sort 3d tree dimensionality assessment using photogrammetry and small unmanned aerial vehicles
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579125/
https://www.ncbi.nlm.nih.gov/pubmed/26393926
http://dx.doi.org/10.1371/journal.pone.0137765
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