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Genome-Wide Identification of the Invertase Gene Family in Populus

Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and ne...

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Autores principales: Chen, Zhong, Gao, Kai, Su, Xiaoxing, Rao, Pian, An, Xinmin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579127/
https://www.ncbi.nlm.nih.gov/pubmed/26393355
http://dx.doi.org/10.1371/journal.pone.0138540
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author Chen, Zhong
Gao, Kai
Su, Xiaoxing
Rao, Pian
An, Xinmin
author_facet Chen, Zhong
Gao, Kai
Su, Xiaoxing
Rao, Pian
An, Xinmin
author_sort Chen, Zhong
collection PubMed
description Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5), 3 vacuolar invertase genes (PtVINV1-3) and 16 neutral/alkaline invertase genes (PtNINV1-16) were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials.
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spelling pubmed-45791272015-10-01 Genome-Wide Identification of the Invertase Gene Family in Populus Chen, Zhong Gao, Kai Su, Xiaoxing Rao, Pian An, Xinmin PLoS One Research Article Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5), 3 vacuolar invertase genes (PtVINV1-3) and 16 neutral/alkaline invertase genes (PtNINV1-16) were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials. Public Library of Science 2015-09-22 /pmc/articles/PMC4579127/ /pubmed/26393355 http://dx.doi.org/10.1371/journal.pone.0138540 Text en © 2015 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chen, Zhong
Gao, Kai
Su, Xiaoxing
Rao, Pian
An, Xinmin
Genome-Wide Identification of the Invertase Gene Family in Populus
title Genome-Wide Identification of the Invertase Gene Family in Populus
title_full Genome-Wide Identification of the Invertase Gene Family in Populus
title_fullStr Genome-Wide Identification of the Invertase Gene Family in Populus
title_full_unstemmed Genome-Wide Identification of the Invertase Gene Family in Populus
title_short Genome-Wide Identification of the Invertase Gene Family in Populus
title_sort genome-wide identification of the invertase gene family in populus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579127/
https://www.ncbi.nlm.nih.gov/pubmed/26393355
http://dx.doi.org/10.1371/journal.pone.0138540
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