Cargando…

A ddRAD Based Linkage Map of the Cultivated Strawberry, Fragaria xananassa

The cultivated strawberry (Fragaria ×ananassa Duch.) is an allo-octoploid considered difficult to disentangle genetically due to its four relatively similar sub-genomic chromosome sets. This has been alleviated by the recent release of the strawberry IStraw90 whole genome genotyping array. However,...

Descripción completa

Detalles Bibliográficos
Autores principales:	Davik, Jahn, Sargent, Daniel James, Brurberg, May Bente, Lien, Sigbjørn, Kent, Matthew, Alsheikh, Muath
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4580419/ https://www.ncbi.nlm.nih.gov/pubmed/26398886 http://dx.doi.org/10.1371/journal.pone.0137746

Ejemplares similares

Identification of QTLs for powdery mildew (Podosphaera aphanis; syn. Sphaerotheca macularis f. sp. fragariae) susceptibility in cultivated strawberry (Fragaria ×ananassa)
por: Sargent, Daniel J., et al.
Publicado: (2019)

ddRAD-seq derived genome-wide SNPs, high density linkage map and QTLs for fruit quality traits in strawberry (Fragaria x ananassa)
por: Natarajan, Sathishkumar, et al.
Publicado: (2020)

High density linkage map construction and QTL mapping for runner production in allo-octoploid strawberry Fragaria × ananassa based on ddRAD-seq derived SNPs
por: Hossain, Mohammad Rashed, et al.
Publicado: (2019)

Major-effect candidate genes identified in cultivated strawberry (Fragaria × ananassa Duch.) for ellagic acid deoxyhexoside and pelargonidin-3-O-malonylglucoside biosynthesis, key polyphenolic compounds
por: Davik, Jahn, et al.
Publicado: (2020)

Generation and analysis of ESTs from strawberry (Fragaria xananassa) fruits and evaluation of their utility in genetic and molecular studies
por: Bombarely, Aureliano, et al.
Publicado: (2010)

Fine-tuning the performance of ddRAD-seq in the peach genome
por: Aballay, Maximiliano Martín, et al.
Publicado: (2021)

Hierarchical genetic structure in an evolving species complex: Insights from genome wide ddRAD data in Sebastes mentella
por: Saha, Atal, et al.
Publicado: (2021)

Integrative “omic” analysis reveals distinctive cold responses in leaves and roots of strawberry, Fragaria × ananassa ‘Korona’
por: Koehler, Gage, et al.
Publicado: (2015)

2b or not 2b? 2bRAD is an effective alternative to ddRAD for phylogenomics
por: Chambers, E. Anne, et al.
Publicado: (2023)

Population genetic assessment of Viburnum japonicum in China using ddRAD-seq
por: Zhu, Hong, et al.
Publicado: (2023)

Evaluation of Linkage Disequilibrium Pattern and Association Study on Seed Oil Content in Brassica napus Using ddRAD Sequencing
por: Wu, Zhikun, et al.
Publicado: (2016)

Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus
por: Scheben, Armin, et al.
Publicado: (2020)

Mapping the sex determination locus in the hāpuku (Polyprion oxygeneios) using ddRAD sequencing
por: Brown, Jeremy K., et al.
Publicado: (2016)

Genotyping Strategies Using ddRAD Sequencing in Farmed Arctic Charr (Salvelinus alpinus)
por: Pappas, Fotis, et al.
Publicado: (2021)

Comparative Transcriptome Analysis Reveals Novel Candidate Resistance Genes Involved in Defence against Phytophthora cactorum in Strawberry
por: Gogoi, Anupam, et al.
Publicado: (2023)

ddRAD sequencing-based identification of inter-genepool SNPs and association analysis in Brassica juncea
por: Sudan, Jebi, et al.
Publicado: (2019)

ddRAD-seq reveals the genetic structure and detects signals of selection in Italian brown trout
por: Magris, Gabriele, et al.
Publicado: (2022)

Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum
por: Chen, Xiao-Ren, et al.
Publicado: (2016)

Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus)
por: Souza, Carla A., et al.
Publicado: (2017)

ddRAD Sequencing-Based Identification of Genomic Boundaries and Permeability in Quercus ilex and Q. suber Hybrids
por: López de Heredia, Unai, et al.
Publicado: (2020)

Molecular Sex Identification in the Hardy Rubber Tree (Eucommia ulmoides Oliver) via ddRAD Markers
por: Wang, Wencai, et al.
Publicado: (2020)

From STRs to SNPs via ddRAD‐seq: Geographic assignment of confiscated tortoises at reduced costs
por: Biello, Roberto, et al.
Publicado: (2022)

Mapping QTL associated with Verticillium dahliae resistance in the cultivated strawberry (Fragaria × ananassa)
por: Antanaviciute, L, et al.
Publicado: (2015)

Linkage mapping, comparative genome analysis, and QTL detection for growth in a non-model teleost, the meagre Argyrosomus regius, using ddRAD sequencing
por: Nousias, O., et al.
Publicado: (2022)

Accumulation Dynamics of Transcripts and Proteins of Cold-Responsive Genes in Fragaria vesca Genotypes of Differing Cold Tolerance
por: Fattash, Isam, et al.
Publicado: (2021)

Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants
por: Yang, Guo-Qian, et al.
Publicado: (2016)

A comparison of different methods for preserving plant molecular materials and the effect of degraded DNA on ddRAD sequencing
por: Guo, Ying, et al.
Publicado: (2018)

Assessment of genetic diversity in Coho salmon (Oncorhynchus kisutch) populations with no family records using ddRAD-seq
por: Hosoya, Sho, et al.
Publicado: (2018)

Scanning of Genetic Variants and Genetic Mapping of Phenotypic Traits in Gilthead Sea Bream Through ddRAD Sequencing
por: Kyriakis, Dimitrios, et al.
Publicado: (2019)

Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos
por: Guo, Cen, et al.
Publicado: (2020)

Corrigendum: ddRAD Sequencing-Based Identification of Genomic Boundaries and Permeability in Quercus ilex and Q. suber Hybrids
por: López de Heredia, Unai, et al.
Publicado: (2022)

ddRAD‐Seq reveals evolutionary insights into population differentiation and the cryptic phylogeography of Hyporhamphus intermedius in Mainland China
por: Wang, Gongpei, et al.
Publicado: (2022)

Genetic mapping and identification of a QTL determining tolerance to freezing stress in Fragaria vesca L.
por: Davik, Jahn, et al.
Publicado: (2021)

High-density ddRAD linkage and yield-related QTL mapping delimits a chromosomal region responsible for oil content in rapeseed (Brassica napus L.)
por: Chen, Jun, et al.
Publicado: (2017)

Mapping of a novel clubroot resistance QTL using ddRAD-seq in Chinese cabbage (Brassica rapa L.)
por: Laila, Rawnak, et al.
Publicado: (2019)

Assessing the genetic diversity of farmed and wild Rufiji tilapia (Oreochromis urolepis urolepis) populations using ddRAD sequencing
por: Nyinondi, Christer S., et al.
Publicado: (2020)

Divergence time estimation using ddRAD data and an isolation-with-migration model applied to water vole populations of Arvicola
por: Balmori-de la Puente, Alfonso, et al.
Publicado: (2022)

The telomere-to-telomere genome of Fragaria vesca reveals the genomic evolution of Fragaria and the origin of cultivated octoploid strawberry
por: Zhou, Yuhan, et al.
Publicado: (2023)

An Autotetraploid Linkage Map of Rose (Rosa hybrida) Validated Using the Strawberry (Fragaria vesca) Genome Sequence
por: Gar, Oron, et al.
Publicado: (2011)

Construction of an Integrated High Density Simple Sequence Repeat Linkage Map in Cultivated Strawberry (Fragaria × ananassa) and its Applicability
por: Isobe, Sachiko N., et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_n34vfv37pjkl8jqs2mum4h1oth